Strain Fitness in Escherichia coli BW25113 around b1860

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
1,941,385	-				+0.0
1,941,492	-				-1.2
1,941,587	+	znuB	b1859	0.19	-0.8
1,941,587	+	znuB	b1859	0.19	-0.2
1,941,589	+	znuB	b1859	0.19	+0.1
1,941,662	+	znuB	b1859	0.28	-2.6
1,941,662	+				+0.9
1,941,704	+	znuB	b1859	0.34	-2.5
1,941,712	-				-1.4
1,941,714	+	znuB	b1859	0.35	-0.7
1,941,749	+	znuB	b1859	0.40	-0.5
1,941,914	+	znuB	b1859	0.61	-2.3
1,941,914	+	znuB	b1859	0.61	-0.0
1,941,978	+	znuB	b1859	0.69	+0.0
1,942,038	+	znuB	b1859	0.76	-3.9
1,942,038	+	znuB	b1859	0.76	-0.1
1,942,094	+	znuB	b1859	0.83	-0.7
1,942,094	+	znuB	b1859	0.83	-0.6
1,942,156	-				+1.0
1,942,156	-				+0.7
1,942,184	+				-1.5
1,942,295	+				+0.8
1,942,295	+				+1.7
1,942,423	+				-1.7
1,942,445	-				+0.3
1,942,446	-				-2.0
1,942,806	+	ruvB	b1860	0.43	-1.6
1,942,985	+	ruvB	b1860	0.61	+0.1
1,943,892	+	ruvA	b1861	0.82	-1.9
1,943,919	-	ruvA	b1861	0.87	-1.2
1,943,934	-	ruvA	b1861	0.89	+0.1
1,943,990	-				-1.4
1,943,996	+				+2.0
1,943,996	+				+0.3
1,944,021	+				+0.0
1,944,102	+				-1.4
1,944,102	+				+1.3
1,944,137	+				-0.7
1,944,333	-				+0.3
1,944,333	-				+0.1