Strain Fitness in Escherichia coli BW25113 around b1799

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
1,877,985	+				-0.1
1,878,018	-				+0.6
1,878,085	-				+0.6
1,878,142	-				+0.7
1,878,142	-				+0.4
1,878,186	+				-0.8
1,878,236	+	yeaS	b1798	0.14	-0.1
1,878,236	+	yeaS	b1798	0.14	-1.5
1,878,236	+	yeaS	b1798	0.14	+2.1
1,878,236	+	yeaS	b1798	0.14	+0.7
1,878,244	-	yeaS	b1798	0.15	-0.7
1,878,244	-	yeaS	b1798	0.15	+0.3
1,878,244	-	yeaS	b1798	0.15	-0.9
1,878,244	-	yeaS	b1798	0.15	-0.1
1,878,303	-	yeaS	b1798	0.25	-3.9
1,878,340	+	yeaS	b1798	0.31	-2.3
1,878,363	+	yeaS	b1798	0.34	-2.6
1,878,363	+	yeaS	b1798	0.34	-1.5
1,878,364	-	yeaS	b1798	0.34	+0.6
1,878,388	-	yeaS	b1798	0.38	-0.8
1,878,414	-	yeaS	b1798	0.42	-1.2
1,878,446	+	yeaS	b1798	0.47	-2.2
1,878,454	-	yeaS	b1798	0.48	-0.2
1,878,484	+	yeaS	b1798	0.53	-0.8
1,878,492	-	yeaS	b1798	0.54	-0.0
1,878,492	-	yeaS	b1798	0.54	+2.7
1,878,492	-	yeaS	b1798	0.54	+0.8
1,878,511	+	yeaS	b1798	0.57	+0.2
1,878,598	-	yeaS	b1798	0.71	-0.2
1,878,598	-	yeaS	b1798	0.71	+0.4
1,878,598	-	yeaS	b1798	0.71	-0.0
1,878,598	-	yeaS	b1798	0.71	+0.4
1,878,608	-	yeaS	b1798	0.72	+1.0
1,878,656	-	yeaS	b1798	0.80	-2.2
1,878,664	-	yeaS	b1798	0.81	+0.1
1,878,721	-				-1.2
1,878,738	+				-0.6
1,878,746	-				-1.0
1,878,752	-				+0.7
1,878,757	+				+0.7
1,878,757	+				+2.2
1,878,775	+				+2.2
1,878,841	+				+2.2
1,878,940	+				+1.2
1,879,004	-	yeaT	b1799	0.10	-0.0
1,879,009	+	yeaT	b1799	0.11	+0.7
1,879,027	-	yeaT	b1799	0.13	-1.4
1,879,118	-	yeaT	b1799	0.23	-0.6
1,879,175	-	yeaT	b1799	0.29	-3.6
1,879,175	-	yeaT	b1799	0.29	-0.8
1,879,210	-	yeaT	b1799	0.32	-2.3
1,879,210	-	yeaT	b1799	0.32	+0.3
1,879,231	-	yeaT	b1799	0.35	-0.8
1,879,245	+	yeaT	b1799	0.36	-1.1
1,879,253	-	yeaT	b1799	0.37	-0.9
1,879,266	+	yeaT	b1799	0.39	-3.2
1,879,340	-	yeaT	b1799	0.47	+0.2
1,879,340	-	yeaT	b1799	0.47	-2.2
1,879,410	+	yeaT	b1799	0.54	+1.2
1,879,426	+	yeaT	b1799	0.56	+0.2
1,879,601	-	yeaT	b1799	0.75	-0.5
1,880,044	+				+0.9
1,880,044	+				-0.0
1,880,069	-	yeaU	b1800	0.12	+0.1
1,880,172	+	yeaU	b1800	0.22	+1.8
1,880,172	+	yeaU	b1800	0.22	-1.7
1,880,373	+	yeaU	b1800	0.40	+0.3
1,880,488	+	yeaU	b1800	0.51	+0.4
1,880,488	+	yeaU	b1800	0.51	-1.2
1,880,489	-	yeaU	b1800	0.51	-1.6
1,880,516	+	yeaU	b1800	0.53	+0.3
1,880,524	-	yeaU	b1800	0.54	+0.3
1,880,535	+	yeaU	b1800	0.55	+0.5
1,880,628	-	yeaU	b1800	0.64	+0.2
1,880,642	+	yeaU	b1800	0.65	+0.7
1,880,706	+	yeaU	b1800	0.71	+0.3
1,880,787	-	yeaU	b1800	0.78	-0.3