Strain Fitness in Escherichia coli BW25113 around b1699

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
1,778,469	+				-0.1
1,778,740	+	ydiR	b1698	0.34	+0.2
1,778,933	-	ydiR	b1698	0.54	-2.8
1,779,145	+	ydiR	b1698	0.77	+0.4
1,779,222	-	ydiR	b1698	0.85	-0.4
1,779,423	-				-0.5
1,779,424	-				+1.3
1,779,424	-				-0.7
1,779,484	+				-0.0
1,779,721	+	ydiS	b1699	0.23	-1.3
1,779,847	+	ydiS	b1699	0.33	-1.3
1,780,127	-	ydiS	b1699	0.55	+1.0
1,780,378	-	ydiS	b1699	0.74	-0.6
1,780,483	-	ydiS	b1699	0.82	-0.3
1,780,483	-	ydiS	b1699	0.82	-1.0
1,780,566	-	ydiS	b1699	0.89	-1.1
1,780,580	+				-2.0
1,780,598	+				-0.8
1,780,939	+	ydiT	b1700	0.80	-2.2
1,781,119	-				+0.0
1,781,209	-				-0.6
1,781,217	-				+0.3
1,781,266	+	fadK	b1701	0.13	-0.3
1,781,399	-	fadK	b1701	0.21	+0.5
1,781,530	+	fadK	b1701	0.29	-0.1