Strain Fitness in Escherichia coli BW25113 around b1161

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
1,210,982	-	elbA	b1160	0.24	+0.2
1,210,987	-	elbA	b1160	0.26	+1.3
1,212,255	-	ycgX	b1161	0.81	+1.0
1,212,292	-				+1.4
1,212,292	-				-2.9
1,212,327	-				+0.6
1,212,328	-				-0.5
1,212,345	-				-0.6
1,212,371	-				-0.1
1,212,371	-				-0.4
1,212,376	-				+1.8
1,212,376	-				-0.6
1,212,425	-				+1.6
1,212,427	+				+0.1
1,212,435	-				-0.2
1,212,435	-				-0.5
1,212,472	+				+0.8
1,212,477	+				-1.8
1,212,477	+				+0.5
1,212,483	+				+0.0
1,212,483	+				+3.5
1,212,579	-				+0.3
1,212,579	-				+0.5
1,212,596	-				+1.8
1,212,618	+				+0.7
1,212,689	-	ycgE	b1162	0.19	-0.7
1,212,689	-	ycgE	b1162	0.19	+0.4
1,212,803	+	ycgE	b1162	0.34	-0.3
1,212,864	-	ycgE	b1162	0.43	+0.3
1,212,892	-	ycgE	b1162	0.47	-0.6
1,212,894	+	ycgE	b1162	0.47	-1.0
1,212,951	-	ycgE	b1162	0.55	+0.6
1,212,954	+	ycgE	b1162	0.55	-2.4
1,212,993	+	ycgE	b1162	0.60	+1.7
1,213,017	-	ycgE	b1162	0.64	-0.2
1,213,051	-	ycgE	b1162	0.68	+0.3
1,213,051	-	ycgE	b1162	0.68	-0.7
1,213,160	-	ycgE	b1162	0.83	+0.4
1,213,171	+	ycgE	b1162	0.85	-0.4
1,213,247	+				-1.9
1,213,265	-				+1.3
1,213,265	-				-0.0
1,213,277	-				+0.7
1,213,301	+				+0.3
1,213,314	+				-0.5
1,213,314	+				-0.0
1,213,314	+				-1.0
1,213,314	+				-0.4