Strain Fitness in Escherichia coli BW25113 around b1107

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
1,162,347	-	ycfM	b1105	0.76	-1.2
1,162,456	-				+0.3
1,162,640	+	ycfN	b1106	0.19	+1.3
1,162,873	-	ycfN	b1106	0.47	+0.6
1,162,875	+	ycfN	b1106	0.48	-1.1
1,162,992	-	ycfN	b1106	0.62	+0.1
1,163,024	+	ycfN	b1106	0.66	+0.7
1,163,057	-	ycfN	b1106	0.70	-0.4
1,163,213	-	ycfN	b1106	0.88	-0.3
1,163,219	+	ycfN	b1106	0.89	-0.2
1,163,220	+	ycfN	b1106	0.89	+0.2
1,163,313	+				+0.5
1,163,324	-				+2.0
1,163,576	+	nagZ	b1107	0.25	+0.4
1,163,576	+	nagZ	b1107	0.25	+0.3
1,163,630	-	nagZ	b1107	0.30	-1.4
1,163,687	+	nagZ	b1107	0.36	+0.8
1,163,695	-	nagZ	b1107	0.37	-1.5
1,163,695	-	nagZ	b1107	0.37	+0.4
1,163,772	+	nagZ	b1107	0.44	+1.1
1,163,819	-	nagZ	b1107	0.49	+0.8
1,163,831	-	nagZ	b1107	0.50	-1.4
1,163,831	-	nagZ	b1107	0.50	-0.1
1,163,855	-	nagZ	b1107	0.52	+2.3
1,163,949	-	nagZ	b1107	0.62	+1.5
1,163,949	-	nagZ	b1107	0.62	-2.7
1,164,356	-				+1.2
1,164,707	-	ycfP	b1108	0.63	+0.6
1,164,715	-	ycfP	b1108	0.64	-0.2
1,164,715	-	ycfP	b1108	0.64	+1.0
1,164,925	+				-0.0
1,164,925	+				-1.1
1,164,943	+				-2.1
1,165,028	-				-0.7
1,165,028	-				-1.4