Strain Fitness in Escherichia coli BW25113 around b0943

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
1,001,765	-	ycbT	b0941	0.69	+0.6
1,001,765	-	ycbT	b0941	0.69	+1.4
1,001,812	-	ycbT	b0941	0.73	-0.3
1,001,915	+	ycbT	b0941	0.83	-0.6
1,001,918	-	ycbT	b0941	0.83	-0.3
1,002,028	+				+0.4
1,002,036	-				+0.2
1,002,041	-				-0.3
1,002,224	-	ycbU	b0942	0.21	+0.7
1,002,323	-	ycbU	b0942	0.39	-0.4
1,002,325	+	ycbU	b0942	0.39	+0.1
1,002,325	+	ycbU	b0942	0.39	+0.2
1,002,418	+	ycbU	b0942	0.56	+0.1
1,002,421	-	ycbU	b0942	0.57	-0.6
1,002,421	-	ycbU	b0942	0.57	-2.9
1,002,522	+	ycbU	b0942	0.76	-0.1
1,002,680	-				-1.1
1,002,688	+				+0.2
1,002,688	+				+0.3
1,002,766	+	b0943	b0943	0.20	+0.5
1,002,795	-	b0943	b0943	0.26	+1.1
1,002,803	+	b0943	b0943	0.27	+0.6
1,002,907	-	b0943	b0943	0.47	+1.2
1,002,921	+	b0943	b0943	0.50	-0.4
1,002,952	-	b0943	b0943	0.56	+1.5
1,002,952	-	b0943	b0943	0.56	+0.4
1,003,071	-	b0943	b0943	0.79	+0.6
1,003,071	-	b0943	b0943	0.79	+1.3
1,003,072	-	b0943	b0943	0.79	-2.8
1,003,109	+	b0943	b0943	0.87	-0.3
1,003,112	+	b0943	b0943	0.87	-0.1
1,003,338	+	ycbF	b0944	0.24	-0.1
1,003,385	+	ycbF	b0944	0.30	-0.9
1,003,393	-	ycbF	b0944	0.31	-1.4
1,003,460	-	ycbF	b0944	0.41	+0.8
1,003,616	+	ycbF	b0944	0.63	-1.5
1,003,627	+	ycbF	b0944	0.64	-0.9
1,003,688	-	ycbF	b0944	0.73	-0.8
1,003,705	-	ycbF	b0944	0.75	+0.5
1,003,705	-	ycbF	b0944	0.75	+0.9
1,003,723	+	ycbF	b0944	0.78	-1.1
1,003,723	+	ycbF	b0944	0.78	+0.0
1,003,775	+	ycbF	b0944	0.85	-0.6
1,003,775	+	ycbF	b0944	0.85	+0.3
1,003,959	-				+0.7
1,004,039	-				-0.3
1,004,050	-				-0.4
1,004,119	+	pyrD	b0945	0.13	-2.4
1,004,126	+	pyrD	b0945	0.13	-0.9
1,004,126	+	pyrD	b0945	0.13	-2.0
1,004,126	+	pyrD	b0945	0.13	-1.1
1,004,134	+	pyrD	b0945	0.14	+1.2
1,004,141	+	pyrD	b0945	0.15	-0.5
1,004,174	-	pyrD	b0945	0.18	-0.9