Strain Fitness in Escherichia coli BW25113 around b4208

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
4,426,911	+				-2.1
4,426,911	+				+1.1
4,426,912	+				+0.2
4,426,922	-				+0.4
4,426,922	-				+0.6
4,426,932	+				-0.7
4,426,932	+				+0.2
4,426,933	+				-0.1
4,426,965	-				+0.5
4,427,007	-				-0.5
4,427,007	-				-0.4
4,427,009	+				-0.8
4,427,022	+	fklB	b4207	0.10	+0.8
4,427,114	+	fklB	b4207	0.25	+0.2
4,427,132	-	fklB	b4207	0.28	+0.2
4,427,161	+	fklB	b4207	0.33	+0.1
4,427,215	-	fklB	b4207	0.41	-0.3
4,427,243	+	fklB	b4207	0.46	-0.3
4,427,251	-	fklB	b4207	0.47	-0.0
4,427,251	-	fklB	b4207	0.47	-0.2
4,427,251	-	fklB	b4207	0.47	+1.1
4,427,298	-				+0.2
4,427,298	-	fklB	b4207	0.55	-0.0
4,427,345	+	fklB	b4207	0.62	-1.0
4,427,371	-	fklB	b4207	0.67	+0.4
4,427,371	-	fklB	b4207	0.67	-0.1
4,427,371	-	fklB	b4207	0.67	+0.1
4,427,381	-	fklB	b4207	0.68	+0.0
4,427,394	-	fklB	b4207	0.70	+0.3
4,427,394	-	fklB	b4207	0.70	-0.1
4,427,415	+	fklB	b4207	0.74	+0.5
4,427,415	+	fklB	b4207	0.74	-0.3
4,427,541	-				-0.2
4,427,541	-				+0.4
4,427,563	+				-0.3
4,427,563	+				-0.2
4,427,580	-				-0.5
4,427,624	-				+0.6
4,427,710	+				+0.3
4,427,783	+				+0.8
4,427,783	+				-0.3
4,427,788	+				+0.3
4,427,806	-				+0.0
4,427,830	-				+0.1
4,427,830	-				+0.0
4,427,840	+				+0.5
4,427,840	+				+0.5
4,427,840	+				+0.5
4,427,850	+				+0.3
4,427,852	-				+0.4
4,427,852	-				+0.3
4,427,906	-				-0.5
4,427,906	-				+0.4
4,427,906	-				+0.4
4,427,961	+				-0.1
4,427,961	+				+0.2
4,427,990	+				-0.3
4,428,012	-				+0.3
4,428,038	+	cycA	b4208	0.11	-0.3
4,428,110	+	cycA	b4208	0.16	-1.6
4,428,171	-	cycA	b4208	0.20	-0.4
4,428,256	+	cycA	b4208	0.26	-0.1
4,428,256	+	cycA	b4208	0.26	-0.6
4,428,257	+	cycA	b4208	0.26	-1.0
4,428,265	-	cycA	b4208	0.27	+0.8
4,428,270	-	cycA	b4208	0.27	-0.5
4,428,275	-	cycA	b4208	0.27	-0.4
4,428,283	-	cycA	b4208	0.28	+0.3
4,428,293	+	cycA	b4208	0.29	-0.4
4,428,293	+	cycA	b4208	0.29	-1.4
4,428,314	-	cycA	b4208	0.30	-0.2
4,428,337	-	cycA	b4208	0.32	-0.5
4,428,375	-	cycA	b4208	0.35	+0.3
4,428,398	+	cycA	b4208	0.36	-0.1
4,428,422	+	cycA	b4208	0.38	-0.3
4,428,427	+	cycA	b4208	0.38	-0.3
4,428,454	-	cycA	b4208	0.40	+0.1
4,428,589	-	cycA	b4208	0.50	-0.2
4,428,690	-	cycA	b4208	0.57	+0.4
4,428,692	-	cycA	b4208	0.57	-0.5
4,428,742	-	cycA	b4208	0.61	-0.5
4,428,752	+	cycA	b4208	0.61	+0.0
4,428,752	+	cycA	b4208	0.61	+0.6
4,428,765	-	cycA	b4208	0.62	-0.5
4,428,765	-	cycA	b4208	0.62	-0.6
4,428,793	+	cycA	b4208	0.64	+0.3
4,428,793	+	cycA	b4208	0.64	-1.1
4,428,793	+	cycA	b4208	0.64	-0.2
4,428,793	+	cycA	b4208	0.64	+0.1
4,428,793	+	cycA	b4208	0.64	-1.1
4,428,793	+	cycA	b4208	0.64	-0.1
4,428,850	-	cycA	b4208	0.68	-0.0
4,428,880	-	cycA	b4208	0.70	-0.2
4,428,980	+	cycA	b4208	0.77	-0.5
4,428,980	+	cycA	b4208	0.77	+0.4
4,428,985	+	cycA	b4208	0.78	-0.2
4,429,009	+	cycA	b4208	0.79	+0.9
4,429,087	-	cycA	b4208	0.85	+0.5
4,429,088	+	cycA	b4208	0.85	+0.3
4,429,111	+	cycA	b4208	0.87	-0.5
4,429,156	-	cycA	b4208	0.90	+0.0
4,429,159	-				+0.7
4,429,176	-				+0.1
4,429,185	-				-0.3
4,429,195	+				+0.3
4,429,221	-				+0.8
4,429,221	-				+1.2
4,429,254	-				+0.8
4,429,280	+				-0.4
4,429,315	+				-0.8
4,429,361	+				+0.3
4,429,373	+				+0.3
4,429,453	+	ytfE	b4209	0.16	-0.1
4,429,453	+	ytfE	b4209	0.16	-0.5
4,429,463	-	ytfE	b4209	0.18	+0.3
4,429,463	-	ytfE	b4209	0.18	+0.2
4,429,466	-	ytfE	b4209	0.18	-0.3
4,429,501	-	ytfE	b4209	0.24	-0.0
4,429,559	+	ytfE	b4209	0.32	+0.4
4,429,559	+	ytfE	b4209	0.32	+0.8
4,429,631	-	ytfE	b4209	0.43	-0.8
4,429,631	-	ytfE	b4209	0.43	+0.4
4,429,798	+	ytfE	b4209	0.68	-0.1
4,429,821	+	ytfE	b4209	0.72	-0.5
4,429,857	-	ytfE	b4209	0.77	+0.9
4,429,907	-	ytfE	b4209	0.85	+0.3
4,429,935	-	ytfE	b4209	0.89	+0.2
4,429,935	-	ytfE	b4209	0.89	+0.0
4,430,003	+				-0.5
4,430,189	-				-0.6
4,430,189	-				-0.1
4,430,189	-				+1.0
4,430,189	-				+0.9
4,430,189	-				+0.6
4,430,196	+				-0.3
4,430,199	-				+0.3
4,430,209	-				+0.1