Strain Fitness in Escherichia coli BW25113 around b2929

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
3,071,717	-				-0.0
3,071,763	-				-0.9
3,071,763	-				+0.0
3,071,942	-				-0.4
3,071,946	+				+0.1
3,071,954	-				+0.3
3,072,064	-				-0.1
3,072,064	-				+0.0
3,072,088	-	yggC	b2928	0.13	+0.3
3,072,160	-	yggC	b2928	0.23	-1.3
3,072,240	-	yggC	b2928	0.34	+0.5
3,072,240	-	yggC	b2928	0.34	+0.5
3,072,340	+	yggC	b2928	0.48	-0.2
3,072,340	+	yggC	b2928	0.48	-0.1
3,072,367	-	yggC	b2928	0.52	-0.1
3,072,434	-	yggC	b2928	0.61	-0.0
3,072,495	+	yggC	b2928	0.70	+0.2
3,072,495	+	yggC	b2928	0.70	+0.1
3,072,551	+	yggC	b2928	0.77	-0.7
3,072,551	+	yggC	b2928	0.77	-0.3
3,072,578	+	yggC	b2928	0.81	-1.5
3,072,612	-	yggC	b2928	0.86	-0.1
3,072,671	+				-0.2
3,072,672	-				+0.1
3,072,695	-				-0.1
3,072,695	-				-0.4
3,072,827	+	yggD	b2929	0.23	+0.1
3,072,856	+	yggD	b2929	0.29	-0.6
3,072,939	-	yggD	b2929	0.45	+0.2
3,072,969	-	yggD	b2929	0.51	+0.3
3,073,062	+	yggD	b2929	0.69	+0.3
3,073,062	+	yggD	b2929	0.69	-0.4
3,073,174	+				-0.2
3,073,204	-				-0.0
3,073,204	-				+0.3
3,073,263	-				+0.1
3,073,272	-				+0.0
3,073,322	+				-0.3
3,073,328	-				-0.3
3,073,330	-				+0.4
3,073,414	-	yggF	b2930	0.18	+0.4
3,073,518	+	yggF	b2930	0.29	+0.7
3,073,518	+	yggF	b2930	0.29	+0.1
3,073,714	+	yggF	b2930	0.49	-0.4
3,073,729	+	yggF	b2930	0.51	-0.1
3,073,729	+	yggF	b2930	0.51	-1.6
3,073,922	-	yggF	b2930	0.71	+0.1
3,073,922	-	yggF	b2930	0.71	+0.1
3,074,056	-	yggF	b2930	0.85	+0.5
3,074,081	-	yggF	b2930	0.87	-0.6
3,074,204	-				-0.6
3,074,204	-				+0.4