Strain Fitness in Escherichia coli BW25113 around b2689

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
2,813,616	+	gshA	b2688	0.46	+1.5
2,813,624	-	gshA	b2688	0.46	+1.9
2,813,779	+	gshA	b2688	0.56	+1.2
2,813,812	-	gshA	b2688	0.58	+1.8
2,813,878	-	gshA	b2688	0.62	+1.5
2,813,881	-	gshA	b2688	0.63	+1.7
2,813,915	-	gshA	b2688	0.65	+2.3
2,813,915	-	gshA	b2688	0.65	+2.2
2,814,108	-	gshA	b2688	0.77	+1.9
2,814,115	+	gshA	b2688	0.78	+2.3
2,814,131	-	gshA	b2688	0.79	+3.0
2,814,131	-	gshA	b2688	0.79	+2.3
2,814,139	+	gshA	b2688	0.79	+2.1
2,814,139	+	gshA	b2688	0.79	+1.8
2,814,144	+	gshA	b2688	0.80	+1.6
2,814,191	+	gshA	b2688	0.83	+1.2
2,814,233	+	gshA	b2688	0.85	+0.8
2,814,233	+	gshA	b2688	0.85	+2.7
2,814,303	+	gshA	b2688	0.90	+2.3
2,814,308	+				+1.5
2,814,308	+				+2.8
2,814,316	-				+2.3
2,814,331	-				+1.9
2,814,373	+				+1.9
2,814,552	+				+0.7
2,814,552	+				+0.7
2,814,709	-	yqaA	b2689	0.41	-2.7
2,814,709	-	yqaA	b2689	0.41	-2.6
2,814,745	-	yqaA	b2689	0.49	-1.9
2,814,798	-	yqaA	b2689	0.62	-0.7
2,814,900	+	yqaA	b2689	0.85	-0.1
2,814,900	+	yqaA	b2689	0.85	-0.5
2,814,981	-				-0.4
2,814,981	-				-3.4
2,814,983	+				-0.0
2,814,983	+				-1.2
2,814,991	+				-0.3
2,815,035	+	yqaB	b2690	0.13	-0.9
2,815,035	+	yqaB	b2690	0.13	+0.1
2,815,051	+	yqaB	b2690	0.16	-0.1
2,815,059	+	yqaB	b2690	0.18	+0.5
2,815,152	+	yqaB	b2690	0.34	-0.0
2,815,153	+	yqaB	b2690	0.34	-0.5
2,815,194	-	yqaB	b2690	0.41	-1.6
2,815,279	+	yqaB	b2690	0.56	+0.8
2,815,381	-	yqaB	b2690	0.74	-1.2
2,815,430	+	yqaB	b2690	0.83	-0.0
2,815,430	+	yqaB	b2690	0.83	+0.1
2,815,430	+	yqaB	b2690	0.83	-0.3
2,815,460	+	yqaB	b2690	0.88	-0.2
2,815,472	+				-0.1
2,815,478	-				-4.0
2,815,480	-				-1.8
2,815,514	-				-1.7
2,815,529	-				+1.4
2,815,922	+				-0.4