Strain Fitness in Escherichia coli BW25113 around b2330

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
2,444,552	-	aroC	b2329	0.13	-3.1
2,444,844	+	aroC	b2329	0.40	-3.4
2,444,866	-	aroC	b2329	0.42	-2.6
2,444,923	-	aroC	b2329	0.47	-1.5
2,444,997	-	aroC	b2329	0.54	-2.5
2,444,997	-	aroC	b2329	0.54	-3.7
2,445,075	+	aroC	b2329	0.61	-3.1
2,445,075	+	aroC	b2329	0.61	-0.7
2,445,180	+	aroC	b2329	0.71	-3.4
2,445,213	+	aroC	b2329	0.74	-1.9
2,445,213	+	aroC	b2329	0.74	-1.5
2,445,219	-	aroC	b2329	0.74	-0.6
2,445,219	-	aroC	b2329	0.74	-3.3
2,445,244	+	aroC	b2329	0.77	-2.7
2,445,326	+	aroC	b2329	0.84	-3.5
2,445,326	+	aroC	b2329	0.84	-3.5
2,445,337	-	aroC	b2329	0.85	-2.7
2,445,337	-	aroC	b2329	0.85	-3.1
2,445,487	-				-3.3
2,445,492	-				-3.2
2,445,514	-				+0.4
2,445,514	-				-0.1
2,445,577	+				+1.4
2,445,660	-	yfcB	b2330	0.14	-1.8
2,445,661	+	yfcB	b2330	0.14	-0.2
2,445,661	+	yfcB	b2330	0.14	+1.4
2,445,767	-	yfcB	b2330	0.25	-0.4
2,446,057	-	yfcB	b2330	0.56	-0.2
2,446,131	+	yfcB	b2330	0.64	-1.1
2,446,369	-				-1.6
2,446,653	-				+0.2
2,446,706	-	yfcN	b2331	0.14	-0.0
2,446,706	-	yfcN	b2331	0.14	+0.4
2,446,713	-	yfcN	b2331	0.15	-2.2
2,446,948	-	yfcN	b2331	0.58	-0.1
2,446,955	+	yfcN	b2331	0.59	-1.2
2,446,963	-	yfcN	b2331	0.61	-1.6
2,446,963	-	yfcN	b2331	0.61	-0.2
2,447,022	+	yfcN	b2331	0.71	-0.8
2,447,073	-	yfcN	b2331	0.81	+0.3
2,447,073	-	yfcN	b2331	0.81	-0.0
2,447,202	+				+0.2
2,447,202	+				+0.9
2,447,217	+				-0.5
2,447,260	-				+0.5
2,447,305	+				+0.3
2,447,305	-				-0.3
2,447,305	-				+0.8
2,447,334	+	b2332	b2332	0.10	-0.2
2,447,350	+	b2332	b2332	0.12	-0.3
2,447,428	+	b2332	b2332	0.22	+0.6
2,447,428	+	b2332	b2332	0.22	-0.6