Strain Fitness in Escherichia coli BW25113 around b1829

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
1,908,762	-	b1828	b1828	0.34	+0.3
1,908,789	-	b1828	b1828	0.36	-0.3
1,908,902	-	b1828	b1828	0.44	-0.2
1,908,922	-	b1828	b1828	0.45	-1.3
1,908,968	-	b1828	b1828	0.49	+1.6
1,909,023	-	b1828	b1828	0.53	+0.1
1,909,405	+	b1828	b1828	0.80	-0.2
1,909,411	+	b1828	b1828	0.81	-0.7
1,909,437	+	b1828	b1828	0.83	-0.3
1,909,623	-				+0.4
1,909,623	-				-0.8
1,909,831	-	htpX	b1829	0.13	+0.4
1,909,831	-	htpX	b1829	0.13	-0.2
1,910,032	+	htpX	b1829	0.35	-1.1
1,910,119	+	htpX	b1829	0.45	-0.1
1,910,119	+	htpX	b1829	0.45	+0.9
1,910,121	+	htpX	b1829	0.46	+0.2
1,910,143	-	htpX	b1829	0.48	+0.1
1,910,228	-	htpX	b1829	0.58	+0.2
1,910,486	-	htpX	b1829	0.87	-0.6
1,910,486	-	htpX	b1829	0.87	+0.1
1,910,624	+				-0.5
1,910,643	+				+0.4
1,910,686	+				-0.8
1,910,686	+				-0.2
1,910,877	-				-0.3
1,910,898	-				+0.7
1,911,010	-				+1.0
1,911,068	+	prc	b1830	0.13	-1.8
1,911,197	-	prc	b1830	0.20	+0.3
1,911,283	+	prc	b1830	0.24	+1.0
1,911,318	+	prc	b1830	0.26	+0.4
1,911,341	-	prc	b1830	0.27	-1.0
1,911,341	-	prc	b1830	0.27	-0.5
1,911,400	-	prc	b1830	0.30	-0.1
1,911,400	-	prc	b1830	0.30	-1.7
1,911,511	-	prc	b1830	0.35	+0.7
1,911,511	-	prc	b1830	0.35	+0.7
1,911,530	-	prc	b1830	0.36	-0.2
1,911,546	-	prc	b1830	0.37	-1.5
1,911,546	-	prc	b1830	0.37	-1.5