Strain Fitness in Escherichia coli BW25113 around b1536

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
1,621,207	-	ydeH	b1535	0.25	+1.0
1,621,207	-	ydeH	b1535	0.25	-1.8
1,621,215	-	ydeH	b1535	0.26	-0.5
1,621,304	-	ydeH	b1535	0.36	-1.3
1,621,307	+	ydeH	b1535	0.36	+0.1
1,621,315	-	ydeH	b1535	0.37	+0.1
1,621,317	+	ydeH	b1535	0.37	+0.1
1,621,323	-	ydeH	b1535	0.38	+1.4
1,621,325	-	ydeH	b1535	0.38	-0.5
1,621,416	-	ydeH	b1535	0.48	-1.2
1,621,439	-	ydeH	b1535	0.51	-0.6
1,621,459	-	ydeH	b1535	0.53	+0.3
1,621,685	-	ydeH	b1535	0.79	+1.6
1,621,685	-	ydeH	b1535	0.79	+0.6
1,621,691	-	ydeH	b1535	0.79	+0.5
1,621,714	+	ydeH	b1535	0.82	+1.0
1,621,722	-	ydeH	b1535	0.83	+0.9
1,621,724	+	ydeH	b1535	0.83	+1.0
1,621,724	+	ydeH	b1535	0.83	+1.1
1,621,724	+	ydeH	b1535	0.83	-0.2
1,621,724	+	ydeH	b1535	0.83	+1.0
1,621,726	+	ydeH	b1535	0.83	+1.1
1,621,732	-	ydeH	b1535	0.84	+3.1
1,621,761	-	ydeH	b1535	0.87	+2.5
1,621,761	-	ydeH	b1535	0.87	+0.3
1,621,789	+				+2.1
1,621,799	+				+0.5
1,621,799	+				-0.2
1,621,799	+				+2.1
1,621,803	+				+2.1
1,621,811	-				+2.1
1,621,813	-				+2.1
1,621,917	-				+1.1
1,621,961	+				+1.1
1,621,973	+				+0.5
1,622,143	-				-1.0
1,622,227	+	ydeI	b1536	0.25	+1.1
1,622,299	-	ydeI	b1536	0.43	-1.4
1,622,299	-	ydeI	b1536	0.43	+0.4
1,622,405	-	ydeI	b1536	0.70	+1.1
1,622,405	-	ydeI	b1536	0.70	+1.1
1,622,409	+	ydeI	b1536	0.71	+0.5
1,622,409	+	ydeI	b1536	0.71	+0.5
1,622,420	+	ydeI	b1536	0.74	+0.5
1,622,420	+	ydeI	b1536	0.74	+1.1
1,622,420	+	ydeI	b1536	0.74	+0.1
1,622,471	-	ydeI	b1536	0.87	+1.1
1,622,527	+				+1.1
1,622,774	-				+1.5
1,622,834	+				+2.1
1,622,835	-				+1.0
1,622,838	-				+0.7
1,622,868	+	ydeJ	b1537	0.14	+1.1
1,622,868	+	ydeJ	b1537	0.14	+2.1
1,622,934	+	ydeJ	b1537	0.26	-1.9
1,622,983	+	ydeJ	b1537	0.36	-2.1
1,622,987	+	ydeJ	b1537	0.37	+0.1
1,623,043	+	ydeJ	b1537	0.47	+0.1
1,623,097	+	ydeJ	b1537	0.58	+0.8
1,623,097	+	ydeJ	b1537	0.58	+0.3
1,623,170	+	ydeJ	b1537	0.72	-1.1
1,623,211	+	ydeJ	b1537	0.80	-0.9
1,623,259	+	ydeJ	b1537	0.89	-0.1
1,623,259	+	ydeJ	b1537	0.89	+0.2
1,623,297	+				-0.3
1,623,297	+				-0.7
1,623,309	-				+2.0
1,623,309	-				-2.7
1,623,411	-				+0.0
1,623,449	+				-0.1
1,623,449	+				+0.0
1,623,501	+				+0.5
1,623,519	-				+0.6