Strain Fitness in Escherichia coli BW25113 around b4652

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
3,767,931	-				+1.6
3,767,931	-				+1.6
3,767,938	-				+1.0
3,768,008	-	yibU	b4652	0.19	+0.7
3,768,008	-	yibU	b4652	0.19	+0.5
3,768,010	-	yibU	b4652	0.20	+0.4
3,768,019	-	yibU	b4652	0.24	+0.5
3,768,055	-	yibU	b4652	0.42	+0.1
3,768,055	-	yibU	b4652	0.42	+0.1
3,768,055	-	yibU	b4652	0.42	+1.1
3,768,064	-	yibU	b4652	0.47	-0.7
3,768,065	-	yibU	b4652	0.47	+0.0
3,768,070	-	yibU	b4652	0.50	+0.4
3,768,070	-	yibU	b4652	0.50	+0.6
3,768,075	-	yibU	b4652	0.52	-0.0
3,768,097	-	yibU	b4652	0.63	-0.1
3,768,098	-	yibU	b4652	0.64	+0.2
3,768,099	-	yibU	b4652	0.64	-0.5
3,768,099	-	yibU	b4652	0.64	-0.7
3,768,099	-	yibU	b4652	0.64	+0.2
3,768,099	-	yibU	b4652	0.64	+0.3
3,768,099	-	yibU	b4652	0.64	+0.6
3,768,099	-	yibU	b4652	0.64	+1.1
3,768,104	-	yibU	b4652	0.67	-0.2
3,768,110	-	yibU	b4652	0.70	+0.5
3,768,110	-	yibU	b4652	0.70	-0.8
3,768,120	-	yibU	b4652	0.75	-0.5
3,768,146	-	yibU	b4652	0.88	+0.6
3,768,227	+				+1.0
3,768,260	-				+0.0
3,768,269	-				+0.1
3,768,269	-				-1.8
3,768,270	-				-0.1
3,768,270	-				+1.1
3,768,302	-				+0.0
3,768,302	-				-0.9
3,768,316	-				-0.0
3,768,324	-				-0.3
3,768,333	-				-0.2
3,768,334	-				+0.4
3,768,344	-				+0.2
3,768,345	-				+0.2
3,768,345	-				-0.0
3,768,351	+				+0.3
3,768,400	-	yibH	b3597	0.12	-3.0
3,768,410	+	yibH	b3597	0.13	-0.7
3,768,435	-	yibH	b3597	0.15	+0.1
3,768,435	-	yibH	b3597	0.15	-0.0
3,768,436	+	yibH	b3597	0.15	+0.1
3,768,437	+	yibH	b3597	0.15	-2.0
3,768,464	-	yibH	b3597	0.17	+0.8
3,768,466	+	yibH	b3597	0.18	-0.4
3,768,492	-	yibH	b3597	0.20	-0.1
3,768,502	-	yibH	b3597	0.21	+0.1
3,768,516	-	yibH	b3597	0.22	+0.3
3,768,516	-	yibH	b3597	0.22	-0.2
3,768,540	+	yibH	b3597	0.24	+0.4
3,768,540	+	yibH	b3597	0.24	-0.1
3,768,540	+	yibH	b3597	0.24	-0.5
3,768,679	+	yibH	b3597	0.36	+0.6
3,768,698	+	yibH	b3597	0.38	-0.9
3,768,706	-	yibH	b3597	0.39	+0.8
3,768,709	+	yibH	b3597	0.39	+0.1
3,768,763	-	yibH	b3597	0.44	+0.4
3,768,763	-	yibH	b3597	0.44	-1.9
3,768,781	+	yibH	b3597	0.45	+0.0
3,768,789	-	yibH	b3597	0.46	+0.4
3,768,834	+	yibH	b3597	0.50	+0.0
3,768,965	-	yibH	b3597	0.61	+0.3
3,768,965	-	yibH	b3597	0.61	+0.3
3,768,996	+	yibH	b3597	0.64	+0.9
3,768,996	+	yibH	b3597	0.64	+0.6
3,769,004	-	yibH	b3597	0.65	+0.7
3,769,004	-	yibH	b3597	0.65	-0.2
3,769,004	-	yibH	b3597	0.65	-0.2
3,769,009	-	yibH	b3597	0.65	-0.1
3,769,011	+	yibH	b3597	0.66	+0.2
3,769,011	+	yibH	b3597	0.66	-2.4
3,769,011	+	yibH	b3597	0.66	-0.8
3,769,017	+	yibH	b3597	0.66	+0.2
3,769,041	-	yibH	b3597	0.68	-0.4
3,769,081	+	yibH	b3597	0.72	+0.1
3,769,088	-	yibH	b3597	0.72	+1.2
3,769,114	-	yibH	b3597	0.75	+0.0