Strain Fitness in Escherichia coli BW25113 around b2749

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
2,870,948	+				+0.3
2,870,948	+				-0.3
2,870,959	+				-0.0
2,870,977	-				-0.1
2,871,097	+	ygbE	b2749	0.19	+0.2
2,871,140	-	ygbE	b2749	0.32	-0.3
2,871,145	-	ygbE	b2749	0.34	-0.3
2,871,145	-	ygbE	b2749	0.34	+0.6
2,871,149	+	ygbE	b2749	0.35	+0.1
2,871,197	-	ygbE	b2749	0.50	-0.9
2,871,197	-	ygbE	b2749	0.50	+2.0
2,871,197	-	ygbE	b2749	0.50	+1.2
2,871,207	-	ygbE	b2749	0.53	-0.1
2,871,207	-	ygbE	b2749	0.53	+0.9
2,871,248	+	ygbE	b2749	0.65	+0.4
2,871,285	-	ygbE	b2749	0.77	+0.4
2,871,290	+	ygbE	b2749	0.78	+0.4
2,871,311	+	ygbE	b2749	0.85	+0.5
2,871,391	+				-0.2
2,871,421	-				-1.8
2,871,534	-	cysC	b2750	0.21	-3.0
2,871,692	-	cysC	b2750	0.47	-0.9
2,871,703	+	cysC	b2750	0.49	-3.6
2,871,807	-	cysC	b2750	0.66	-3.2
2,871,807	-	cysC	b2750	0.66	-2.6
2,871,866	+	cysC	b2750	0.75	-5.0
2,871,866	+	cysC	b2750	0.75	-3.8
2,871,907	-	cysC	b2750	0.82	-2.7
2,871,911	-	cysC	b2750	0.83	-3.7
2,871,919	+	cysC	b2750	0.84	-2.5
2,871,952	+	cysC	b2750	0.90	-1.3
2,871,953	-	cysC	b2750	0.90	-4.4
2,871,966	-				-1.9
2,871,968	-				-3.3
2,872,057	-				-3.8
2,872,264	+	cysN	b2751	0.18	-0.9
2,872,298	+	cysN	b2751	0.20	-3.4