Strain Fitness in Escherichia coli BW25113 around b3869

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
4,052,328	-	glnG	b3868	0.31	-0.1
4,052,423	+	glnG	b3868	0.38	-0.6
4,052,423	+	glnG	b3868	0.38	+0.5
4,052,497	+	glnG	b3868	0.43	+0.4
4,052,497	+	glnG	b3868	0.43	+0.2
4,052,614	+	glnG	b3868	0.51	-1.3
4,052,688	+	glnG	b3868	0.56	+0.6
4,052,712	+	glnG	b3868	0.58	-0.7
4,052,769	-	glnG	b3868	0.62	-0.2
4,052,784	-	glnG	b3868	0.63	+0.4
4,052,784	-	glnG	b3868	0.63	-0.0
4,052,812	-	glnG	b3868	0.65	-0.7
4,052,905	+	glnG	b3868	0.72	-0.1
4,052,905	+	glnG	b3868	0.72	-0.1
4,053,033	+	glnG	b3868	0.81	-0.2
4,053,084	-	glnG	b3868	0.85	-1.0
4,053,109	+	glnG	b3868	0.86	-0.4
4,053,109	+	glnG	b3868	0.86	+1.1
4,053,179	+				-0.4
4,053,228	-				-0.2
4,053,266	+				+0.8
4,053,266	+				+0.6
4,053,287	-				-0.4
4,053,292	-				+0.1
4,053,292	-				+0.6
4,053,310	+				+0.0
4,053,310	+				+0.6
4,053,316	+				-0.3
4,053,351	+				+0.7
4,053,351	+				+0.6
4,053,351	+				+1.1
4,053,359	-				+0.3
4,053,359	-				+0.4
4,053,417	+				+0.2
4,053,420	-	glnL	b3869	0.10	+0.6
4,053,420	-	glnL	b3869	0.10	+0.5
4,053,423	+	glnL	b3869	0.10	+0.1
4,053,496	+	glnL	b3869	0.17	+0.3
4,053,496	+	glnL	b3869	0.17	+0.0
4,053,503	-	glnL	b3869	0.18	+0.3
4,053,540	+	glnL	b3869	0.22	-0.7
4,053,540	+	glnL	b3869	0.22	+1.2
4,053,608	-	glnL	b3869	0.28	+0.7
4,053,608	-	glnL	b3869	0.28	+0.1
4,053,617	-	glnL	b3869	0.29	+0.8
4,053,617	-	glnL	b3869	0.29	+0.4
4,053,680	-	glnL	b3869	0.35	+0.7
4,053,680	-	glnL	b3869	0.35	+0.7
4,053,683	-	glnL	b3869	0.35	+0.4
4,053,713	-	glnL	b3869	0.38	+0.4
4,053,753	+	glnL	b3869	0.42	+0.0
4,053,768	-	glnL	b3869	0.43	-0.0
4,053,768	-	glnL	b3869	0.43	-0.3
4,053,788	-	glnL	b3869	0.45	+0.3
4,053,790	+	glnL	b3869	0.45	+0.4
4,053,801	+	glnL	b3869	0.46	+1.8
4,053,803	-	glnL	b3869	0.47	+0.3
4,053,837	+	glnL	b3869	0.50	-0.2
4,053,837	+	glnL	b3869	0.50	+0.4
4,053,851	-	glnL	b3869	0.51	+1.1
4,053,851	-	glnL	b3869	0.51	+0.7
4,053,979	+	glnL	b3869	0.63	+0.4
4,053,982	+				+4.2
4,053,988	+	glnL	b3869	0.64	-1.5
4,054,065	+	glnL	b3869	0.72	+0.5
4,054,079	-	glnL	b3869	0.73	+0.3
4,054,124	-	glnL	b3869	0.77	+0.6
4,054,170	+	glnL	b3869	0.82	-0.6
4,054,299	+				-1.1
4,054,309	+				-0.6
4,054,367	-				+0.0
4,054,367	-				+0.4
4,054,476	+				-0.5
4,054,481	-				-2.1
4,054,481	-				-0.6
4,054,523	+				-0.3
4,054,523	+				+0.1
4,054,549	-				-0.3
4,054,568	-				+0.3
4,054,576	+				+0.5
4,054,616	-				-0.7
4,054,616	-				+0.5
4,054,616	-				-0.2
4,054,655	+				-0.4
4,054,657	+				-1.1
4,054,663	-				-1.3
4,054,725	-				-1.7
4,054,914	+	glnA	b3870	0.19	-1.7
4,054,950	+	glnA	b3870	0.21	-2.2
4,055,087	+	glnA	b3870	0.31	-1.3
4,055,096	+	glnA	b3870	0.32	-0.0
4,055,186	-	glnA	b3870	0.38	-2.1
4,055,214	+	glnA	b3870	0.40	-1.5
4,055,222	-	glnA	b3870	0.41	-0.4
4,055,262	-	glnA	b3870	0.44	-2.6
4,055,331	-	glnA	b3870	0.48	-1.6