Strain Fitness in Escherichia coli BW25113 around b3443
Experiment: Ying_sugar7 rep C; time point 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_sugar7 rep C; time point 1 |
---|---|---|---|---|---|
remove | |||||
3,580,425 | - | yhhZ | b3442 | 0.46 | +2.7 |
3,580,473 | + | yhhZ | b3442 | 0.50 | +2.7 |
3,581,376 | - | yrhA | b3443 | 0.83 | -0.6 |
3,581,399 | - | yrhA | b3443 | 0.89 | +1.0 |
3,581,399 | - | yrhA | b3443 | 0.89 | +0.8 |
3,581,402 | + | yrhA | b3443 | 0.90 | +1.7 |
3,581,410 | - | +1.7 | |||
3,581,452 | - | -0.0 | |||
3,581,509 | - | +0.5 |
Or see this region's nucleotide sequence