Strain Fitness in Escherichia coli BW25113 around b2259

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
2,370,294	-	arnT	b2257	0.83	+0.0
2,370,308	+	arnT	b2257	0.83	+0.2
2,370,308	+	arnT	b2257	0.83	-0.1
2,370,326	-	arnT	b2257	0.84	+0.3
2,370,493	+				-0.1
2,370,551	+				+0.2
2,370,608	-				-1.0
2,370,715	+	yfbW	b4544	0.40	-0.3
2,370,722	-	yfbW	b4544	0.43	+0.3
2,370,723	-	yfbW	b4544	0.43	-1.3
2,370,723	-	yfbW	b4544	0.43	+0.2
2,370,747	+	yfbW	b4544	0.50	-0.3
2,370,747	+	yfbW	b4544	0.50	-0.2
2,370,909	+				+0.1
2,370,909	-				+0.2
2,370,911	+				-0.1
2,371,053	+	b2258	b2258	0.36	-0.2
2,371,397	-	pmrD	b2259	0.39	+0.9
2,371,562	-				-0.2
2,371,624	-				+1.0
2,371,624	-				+0.5
2,371,647	-				+0.7
2,371,755	-				-0.4
2,371,760	-				-0.1
2,371,831	-	menE	b2260	0.12	-0.0
2,371,831	-	menE	b2260	0.12	-0.1
2,371,939	+	menE	b2260	0.20	-0.5
2,371,939	+	menE	b2260	0.20	-0.5
2,371,970	+	menE	b2260	0.22	+0.1
2,371,995	+	menE	b2260	0.24	+0.2
2,372,001	+	menE	b2260	0.24	+0.2
2,372,001	+	menE	b2260	0.24	-0.0
2,372,019	-	menE	b2260	0.26	+0.4
2,372,019	-	menE	b2260	0.26	-0.4
2,372,168	-	menE	b2260	0.37	+0.3
2,372,209	+	menE	b2260	0.40	-0.2
2,372,209	+	menE	b2260	0.40	-0.1
2,372,223	-	menE	b2260	0.41	-0.0
2,372,345	-	menE	b2260	0.50	+0.6
2,372,355	-	menE	b2260	0.51	-0.3
2,372,366	-	menE	b2260	0.51	-0.1
2,372,401	+	menE	b2260	0.54	-0.0
2,372,504	-	menE	b2260	0.62	+0.2