Strain Fitness in Escherichia coli BW25113 around b4225

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
4,445,736	+				-0.0
4,445,737	+				+0.8
4,445,737	+				+1.0
4,445,770	-				+0.6
4,445,794	+				+0.4
4,445,806	+				+0.0
4,445,806	+				+0.4
4,445,806	+				+0.0
4,445,836	+				+0.2
4,445,836	+				-0.5
4,445,859	-				+0.6
4,445,866	+				+0.0
4,445,866	+				+0.8
4,445,962	+	ytfP	b4222	0.13	+0.2
4,445,962	+	ytfP	b4222	0.13	+0.8
4,446,046	-	ytfP	b4222	0.38	+0.4
4,446,131	+	ytfP	b4222	0.63	-0.5
4,446,166	+	ytfP	b4222	0.73	+0.2
4,446,166	+	ytfP	b4222	0.73	-0.4
4,446,166	+	ytfP	b4222	0.73	-0.7
4,446,176	+	ytfP	b4222	0.76	-0.2
4,446,176	-	ytfP	b4222	0.76	+1.5
4,446,176	-	ytfP	b4222	0.76	+0.8
4,446,176	-	ytfP	b4222	0.76	-2.7
4,446,184	-	ytfP	b4222	0.78	-0.5
4,446,184	-	ytfP	b4222	0.78	-0.3
4,446,240	+				+0.1
4,446,259	+				-0.5
4,446,260	+				+0.4
4,446,272	-				-0.3
4,446,273	-				+0.5
4,446,273	-				+0.5
4,446,375	-				+0.3
4,446,454	+				+0.5
4,446,454	+				-1.4
4,446,496	+	chpS	b4224	0.10	+0.2
4,446,501	+	chpS	b4224	0.12	+0.0
4,446,501	+	chpS	b4224	0.12	+0.3
4,446,509	-	chpS	b4224	0.15	-0.5
4,446,509	-	chpS	b4224	0.15	+0.6
4,446,514	-	chpS	b4224	0.17	+0.5
4,446,559	+	chpS	b4224	0.35	+1.4
4,446,569	-	chpS	b4224	0.39	-0.2
4,446,569	-	chpS	b4224	0.39	+0.2
4,446,646	-	chpS	b4224	0.70	+0.6
4,446,652	-	chpS	b4224	0.72	-0.1
4,446,746	+				-0.1
4,446,777	+	chpB	b4225	0.18	+0.3
4,446,787	+	chpB	b4225	0.21	+0.1
4,446,787	+	chpB	b4225	0.21	-0.2
4,446,787	-	chpB	b4225	0.21	+0.4
4,446,787	-	chpB	b4225	0.21	+0.5
4,446,794	+	chpB	b4225	0.23	+1.2
4,446,910	+	chpB	b4225	0.56	+0.4
4,446,916	-	chpB	b4225	0.57	+0.3
4,446,945	+	chpB	b4225	0.66	+1.1
4,446,949	-	chpB	b4225	0.67	+0.2
4,446,960	+	chpB	b4225	0.70	+0.3
4,447,006	-	chpB	b4225	0.83	-0.6
4,447,006	-	chpB	b4225	0.83	+0.8
4,447,057	+				-0.1
4,447,060	+				-0.6
4,447,060	+				+0.0
4,447,779	+				-0.5
4,447,787	+				-0.8
4,447,792	+				+0.1
4,447,795	-				+0.4
4,447,795	-				+0.2
4,447,797	+				+0.0
4,447,970	+				-0.1
4,447,978	-				-0.1
4,447,983	-				+0.8
4,447,983	-				-1.6
4,448,010	+				+0.5
4,448,039	+				-0.5
4,448,039	-				-0.3