Strain Fitness in Escherichia coli BW25113 around b3169
Experiment: Ying_sugar7 rep B; time point 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Ying_sugar7 rep B; time point 1 |
|---|---|---|---|---|---|
| remove | |||||
| 3,313,766 | - | infB | b3168 | 0.90 | -1.7 |
| 3,313,842 | - | -1.3 | |||
| 3,313,932 | - | -1.6 | |||
| 3,313,976 | - | -2.3 | |||
| 3,314,038 | - | -0.5 | |||
| 3,314,051 | - | +0.2 | |||
| 3,314,051 | - | +0.1 | |||
| 3,314,233 | - | nusA | b3169 | 0.12 | -2.4 |
| 3,314,249 | - | nusA | b3169 | 0.13 | -3.5 |
| 3,314,252 | - | nusA | b3169 | 0.13 | -1.3 |
| 3,314,302 | - | nusA | b3169 | 0.16 | -2.4 |
| 3,314,302 | - | nusA | b3169 | 0.16 | -1.0 |
| 3,314,302 | - | nusA | b3169 | 0.16 | -1.1 |
| 3,316,026 | - | -0.2 | |||
| 3,316,402 | + | +1.0 | |||
| 3,316,506 | - | -1.2 | |||
| 3,316,506 | - | +0.2 |
Or see this region's nucleotide sequence