Strain Fitness in Escherichia coli BW25113 around b2948

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
3,090,004	+	gshB	b2947	0.11	+2.0
3,090,085	-	gshB	b2947	0.19	+1.4
3,090,085	-	gshB	b2947	0.19	+1.4
3,090,092	-	gshB	b2947	0.20	+1.7
3,090,222	+	gshB	b2947	0.34	+1.5
3,090,458	-	gshB	b2947	0.59	+1.8
3,090,479	-	gshB	b2947	0.61	+1.4
3,090,479	-	gshB	b2947	0.61	+1.4
3,090,486	-	gshB	b2947	0.62	+1.4
3,090,562	-	gshB	b2947	0.70	+1.9
3,090,562	-	gshB	b2947	0.70	+1.5
3,090,576	+	gshB	b2947	0.71	+1.3
3,090,811	+				+1.2
3,090,847	-				+2.1
3,090,847	-				+1.5
3,090,883	+				-0.2
3,090,883	+				-1.6
3,090,893	-				+0.2
3,090,893	-				+0.9
3,091,078	-	yqgE	b2948	0.21	+0.2
3,091,078	-	yqgE	b2948	0.21	+1.2
3,091,140	+	yqgE	b2948	0.32	+0.8
3,091,140	+	yqgE	b2948	0.32	+0.6
3,091,271	-	yqgE	b2948	0.55	+1.1
3,091,271	-	yqgE	b2948	0.55	+1.7
3,091,328	+	yqgE	b2948	0.65	+0.3
3,091,534	+				-0.3
3,091,929	+				-0.6
3,091,942	+				+0.1
3,091,973	-				+0.2
3,091,973	-				+0.3
3,091,982	-				-0.1
3,092,008	-				-0.1
3,092,032	+				-0.1
3,092,032	+				-0.1
3,092,034	+				-0.8
3,092,053	+				-0.3
3,092,156	-				-0.1
3,092,156	-				+0.4
3,092,336	-	yggR	b2950	0.22	-0.0
3,092,338	+	yggR	b2950	0.22	+1.1
3,092,338	+	yggR	b2950	0.22	+0.9
3,092,357	-	yggR	b2950	0.24	+0.1
3,092,395	+	yggR	b2950	0.28	+0.3
3,092,398	+	yggR	b2950	0.28	-0.1