Strain Fitness in Escherichia coli BW25113 around b2579

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
2,713,329	-				+0.2
2,713,412	+				-0.1
2,713,412	+				-0.1
2,713,500	+				-0.6
2,713,508	-	yfiK	b2578	0.11	-0.1
2,713,508	-	yfiK	b2578	0.11	-0.8
2,713,525	+	yfiK	b2578	0.14	+0.1
2,713,525	+	yfiK	b2578	0.14	+0.2
2,713,533	+	yfiK	b2578	0.15	-0.1
2,713,663	+	yfiK	b2578	0.37	+0.2
2,713,692	-	yfiK	b2578	0.42	-0.4
2,713,761	+	yfiK	b2578	0.54	-0.1
2,713,815	+	yfiK	b2578	0.63	-0.1
2,713,815	+	yfiK	b2578	0.63	-0.1
2,713,815	+	yfiK	b2578	0.63	+0.3
2,713,815	+	yfiK	b2578	0.63	-0.2
2,713,833	+	yfiK	b2578	0.66	-0.5
2,713,833	+	yfiK	b2578	0.66	+0.3
2,714,065	-				+0.0
2,714,072	+				-0.1
2,714,072	+				-0.6
2,714,093	+				+0.2
2,714,105	+				+0.0
2,714,129	+	yfiD	b2579	0.11	+1.5
2,714,220	+	yfiD	b2579	0.34	+0.2
2,714,220	+	yfiD	b2579	0.34	+0.4
2,714,255	+	yfiD	b2579	0.43	+0.1
2,714,430	+	yfiD	b2579	0.89	-0.1
2,714,557	-				-0.0
2,714,557	-				+0.7
2,714,652	-				-0.0
2,714,777	-				+0.4
2,714,937	-	ung	b2580	0.23	-0.0
2,714,940	+	ung	b2580	0.24	-0.2
2,714,978	+	ung	b2580	0.29	+0.0
2,715,050	+	ung	b2580	0.40	+0.3
2,715,089	+	ung	b2580	0.45	+0.1
2,715,121	+	ung	b2580	0.50	+0.6
2,715,161	+	ung	b2580	0.56	-0.2
2,715,195	-	ung	b2580	0.61	+0.2
2,715,311	+	ung	b2580	0.78	-0.1
2,715,451	+				+0.4