Strain Fitness in Escherichia coli BW25113 around b0627
Experiment: Ying_sugar7 rep B; time point 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_sugar7 rep B; time point 1 |
---|---|---|---|---|---|
remove | |||||
657,208 | + | -0.0 | |||
657,425 | - | ybeM | b4581 | 0.22 | -0.1 |
657,782 | + | ybeM | b4581 | 0.67 | +0.5 |
657,836 | + | ybeM | b4581 | 0.74 | -0.2 |
657,836 | + | ybeM | b4581 | 0.74 | +0.0 |
657,836 | - | ybeM | b4581 | 0.74 | -0.6 |
657,898 | - | ybeM | b4581 | 0.82 | +0.8 |
657,917 | + | ybeM | b4581 | 0.84 | -0.0 |
657,945 | + | ybeM | b4581 | 0.88 | +0.1 |
657,963 | + | -0.1 | |||
657,963 | + | +0.2 | |||
658,011 | - | -0.7 | |||
658,163 | - | +0.3 | |||
658,218 | + | tatE | b0627 | 0.24 | -0.1 |
658,234 | - | tatE | b0627 | 0.31 | -1.1 |
658,234 | - | tatE | b0627 | 0.31 | +0.6 |
658,262 | + | tatE | b0627 | 0.45 | +1.2 |
658,262 | + | tatE | b0627 | 0.45 | +0.8 |
658,385 | + | +0.2 | |||
658,460 | - | -1.8 | |||
658,460 | - | -0.2 |
Or see this region's nucleotide sequence