Strain Fitness in Escherichia coli BW25113 around b0078

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
86,357	+	ilvI	b0077	0.42	-2.3
86,357	+	ilvI	b0077	0.42	-0.7
86,366	-	ilvI	b0077	0.43	-0.5
86,367	+	ilvI	b0077	0.43	-2.0
86,438	+	ilvI	b0077	0.47	-0.8
86,447	-	ilvI	b0077	0.47	-2.8
86,447	-	ilvI	b0077	0.47	-2.2
86,508	+	ilvI	b0077	0.51	-1.2
86,517	+	ilvI	b0077	0.51	-1.0
86,535	-	ilvI	b0077	0.52	-0.6
86,535	-	ilvI	b0077	0.52	-1.6
86,548	-	ilvI	b0077	0.53	-1.4
86,593	-	ilvI	b0077	0.56	-1.8
86,602	+	ilvI	b0077	0.56	-2.0
86,602	+	ilvI	b0077	0.56	-2.7
86,797	+	ilvI	b0077	0.68	-1.2
86,841	+	ilvI	b0077	0.70	-1.4
86,894	-	ilvI	b0077	0.73	-1.7
86,899	+	ilvI	b0077	0.74	-1.1
87,001	-	ilvI	b0077	0.79	-1.6
87,026	+	ilvI	b0077	0.81	-1.4
87,034	-	ilvI	b0077	0.81	-2.2
87,062	-	ilvI	b0077	0.83	-1.0
87,070	+	ilvI	b0077	0.83	-2.7
87,070	+	ilvI	b0077	0.83	-1.9
87,092	-	ilvI	b0077	0.85	-2.6
87,098	-	ilvI	b0077	0.85	-1.6
87,098	-	ilvI	b0077	0.85	-3.7
87,130	+	ilvI	b0077	0.87	-2.2
87,165	-	ilvI	b0077	0.89	-1.8
87,166	-	ilvI	b0077	0.89	-1.7
87,250	+				-1.9
87,285	+				-0.5
87,443	-	ilvH	b0078	0.17	-1.5
87,480	+	ilvH	b0078	0.25	-2.4
87,497	+	ilvH	b0078	0.28	-1.2
87,571	+	ilvH	b0078	0.43	-1.1
87,571	+	ilvH	b0078	0.43	-2.8
87,588	-	ilvH	b0078	0.47	-0.7
87,617	-	ilvH	b0078	0.53	-1.6
87,617	-	ilvH	b0078	0.53	-2.0
87,640	+	ilvH	b0078	0.58	-1.7
87,665	-	ilvH	b0078	0.63	-2.2
87,698	-	ilvH	b0078	0.69	-2.6
87,705	+	ilvH	b0078	0.71	-1.0
87,710	+	ilvH	b0078	0.72	-1.3
87,710	+	ilvH	b0078	0.72	-2.5
87,718	-	ilvH	b0078	0.73	-1.4
87,718	-	ilvH	b0078	0.73	-2.0
87,718	-	ilvH	b0078	0.73	-0.8
87,718	-	ilvH	b0078	0.73	-2.2
87,740	-	ilvH	b0078	0.78	-1.8
87,744	-	ilvH	b0078	0.79	-1.7
87,785	+	ilvH	b0078	0.87	-1.3
87,802	+				-1.0
87,815	-				-0.9
87,918	-				-0.1
87,951	-				-0.5
87,955	+				-0.3
88,009	+				-0.2
88,074	+				-0.8
88,085	+				+0.9
88,111	-				+0.9
88,111	-				+0.3
88,111	-				+0.2
88,111	-				-1.1
88,113	-				-0.6
88,187	+	fruR	b0080	0.16	-1.2
88,187	+	fruR	b0080	0.16	-0.3
88,259	-	fruR	b0080	0.23	-1.1
88,265	+	fruR	b0080	0.24	-0.2
88,365	+	fruR	b0080	0.34	+0.2
88,365	+	fruR	b0080	0.34	-0.1
88,432	+	fruR	b0080	0.40	-3.7
88,432	+	fruR	b0080	0.40	-0.7
88,471	-	fruR	b0080	0.44	-1.7
88,482	+	fruR	b0080	0.45	-0.1
88,490	-	fruR	b0080	0.46	-1.0
88,492	+	fruR	b0080	0.46	-0.1
88,492	+	fruR	b0080	0.46	-0.9
88,492	+	fruR	b0080	0.46	+0.1
88,500	-	fruR	b0080	0.47	-1.8
88,517	-	fruR	b0080	0.49	-0.5
88,517	-	fruR	b0080	0.49	-0.3
88,683	+	fruR	b0080	0.65	-1.6
88,753	+	fruR	b0080	0.72	+0.2
88,772	+				+0.2
88,774	+	fruR	b0080	0.74	-1.0
88,821	+	fruR	b0080	0.79	-2.0