Strain Fitness in Escherichia coli BW25113 around b2022

Experiment: Ying_sugar7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 1
2,090,721	-	hisC	b2021	0.28	-3.7
2,090,808	-	hisC	b2021	0.36	-4.9
2,090,932	+	hisC	b2021	0.48	-4.3
2,090,932	+	hisC	b2021	0.48	-5.0
2,090,938	+	hisC	b2021	0.48	-5.1
2,091,102	+	hisC	b2021	0.63	-4.6
2,091,202	-	hisC	b2021	0.73	-4.0
2,091,202	-	hisC	b2021	0.73	-0.6
2,091,274	+	hisC	b2021	0.80	-4.2
2,091,351	+	hisC	b2021	0.87	-3.0
2,091,593	-				-2.3
2,091,593	-				-1.5
2,091,619	-	hisB	b2022	0.12	-4.1
2,091,659	+	hisB	b2022	0.16	-5.1
2,091,985	-	hisB	b2022	0.46	-3.5
2,092,013	-	hisB	b2022	0.49	-2.6
2,092,013	-	hisB	b2022	0.49	-5.6
2,092,070	+	hisB	b2022	0.54	-5.8
2,092,080	+	hisB	b2022	0.55	-3.9
2,092,114	-	hisB	b2022	0.58	-1.5
2,092,160	+	hisB	b2022	0.63	-4.4
2,092,171	-	hisB	b2022	0.64	-2.7
2,092,193	-	hisB	b2022	0.66	-4.5
2,092,193	-	hisB	b2022	0.66	-2.6
2,092,355	+	hisB	b2022	0.81	-3.0
2,092,355	+	hisB	b2022	0.81	-4.5
2,092,359	-	hisB	b2022	0.81	-3.3
2,092,406	+	hisB	b2022	0.86	-1.7
2,092,406	+	hisB	b2022	0.86	-3.6
2,092,412	+	hisB	b2022	0.86	-3.6
2,092,412	+	hisB	b2022	0.86	-1.7
2,092,464	+				-2.7
2,092,533	-				-4.4
2,092,549	-				-1.0
2,092,752	-	hisH	b2023	0.33	-4.0
2,092,772	-	hisH	b2023	0.36	-3.0
2,092,907	+	hisH	b2023	0.59	-3.6
2,093,026	+	hisH	b2023	0.79	-3.4
2,093,026	+	hisH	b2023	0.79	-4.5
2,093,071	+	hisH	b2023	0.87	-1.2
2,093,071	+	hisH	b2023	0.87	-2.0
2,093,079	-	hisH	b2023	0.88	-4.9
2,093,079	-	hisH	b2023	0.88	-4.9
2,093,079	-	hisH	b2023	0.88	-2.5
2,093,079	-	hisH	b2023	0.88	-4.7
2,093,094	-				-3.3
2,093,183	+				-6.0
2,093,183	+				-3.8
2,093,454	-	hisA	b2024	0.41	-4.7
2,093,510	-	hisA	b2024	0.49	-6.0