Strain Fitness in Escherichia coli BW25113 around b0223

Experiment: Ying_sugar7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 1
243,467	+				-0.0
243,501	-				+0.2
243,670	-	lpcA	b0222	0.22	-3.2
243,717	+	lpcA	b0222	0.30	-3.1
243,853	+	lpcA	b0222	0.54	-1.5
243,853	+	lpcA	b0222	0.54	-2.4
243,866	-	lpcA	b0222	0.56	-3.3
243,866	-	lpcA	b0222	0.56	-2.7
243,893	-	lpcA	b0222	0.60	-4.6
243,903	+	lpcA	b0222	0.62	-2.3
244,003	+	lpcA	b0222	0.79	-4.4
244,070	-				-2.8
244,078	+				-3.2
244,080	-				-2.6
244,124	-				+0.5
244,129	-				-0.6
244,159	+				+0.0
244,197	+				-0.1
244,217	-				+0.1
244,311	+				-0.2
244,311	+				+0.5
244,319	-				-0.9
244,371	-				-1.7
244,396	-				-0.4
244,396	-				-0.0
244,442	+	yafJ	b0223	0.15	+0.1
244,453	+	yafJ	b0223	0.16	-0.6
244,516	+	yafJ	b0223	0.25	-0.7
244,551	+	yafJ	b0223	0.29	-0.5
244,564	-	yafJ	b0223	0.31	-2.9
244,564	-	yafJ	b0223	0.31	-0.7
244,616	+	yafJ	b0223	0.38	-0.1
244,616	+	yafJ	b0223	0.38	-1.0
244,637	-	yafJ	b0223	0.40	-1.0
244,728	+	yafJ	b0223	0.52	-0.3
244,763	-	yafJ	b0223	0.57	-0.4
244,799	-	yafJ	b0223	0.61	-0.0
244,799	-	yafJ	b0223	0.61	-0.0
244,868	+	yafJ	b0223	0.70	-0.7
245,001	-	yafJ	b0223	0.88	-0.8
245,001	-	yafJ	b0223	0.88	-0.7
245,011	-	yafJ	b0223	0.89	-0.1
245,083	+				-0.6
245,117	-				-1.0
245,175	+	yafK	b0224	0.15	-0.0
245,187	+	yafK	b0224	0.16	+0.3
245,207	+	yafK	b0224	0.19	+0.1
245,278	-	yafK	b0224	0.29	-0.1
245,278	-	yafK	b0224	0.29	-0.7
245,285	+	yafK	b0224	0.30	-0.2
245,296	-	yafK	b0224	0.31	+0.5
245,315	-	yafK	b0224	0.34	-0.6
245,315	-	yafK	b0224	0.34	+0.0
245,355	-	yafK	b0224	0.39	-0.2
245,357	-	yafK	b0224	0.39	-0.1
245,388	-	yafK	b0224	0.44	+0.3
245,388	-	yafK	b0224	0.44	+0.5
245,407	+	yafK	b0224	0.46	-1.1
245,431	-	yafK	b0224	0.49	-0.0
245,448	-	yafK	b0224	0.52	+0.8
245,480	-	yafK	b0224	0.56	-0.5
245,524	-	yafK	b0224	0.62	-0.1
245,524	-	yafK	b0224	0.62	+0.0
245,526	+	yafK	b0224	0.62	-0.3
245,611	+	yafK	b0224	0.74	-0.5
245,611	+	yafK	b0224	0.74	+0.1
245,671	+	yafK	b0224	0.82	-0.5
245,679	-	yafK	b0224	0.83	-0.6
245,704	-	yafK	b0224	0.86	+0.6
245,704	-				-0.6
245,706	-	yafK	b0224	0.87	+0.2
245,706	-	yafK	b0224	0.87	+0.3
245,706	-	yafK	b0224	0.87	+0.3
245,735	-				-0.4
245,743	-				+0.0
245,743	-				+0.0
245,837	+				+0.3
245,928	-				-0.5
245,928	-				+0.7
245,964	+				+0.2
245,964	+				+0.1
245,971	-				-0.4
246,048	+	yafQ	b0225	0.31	-0.6
246,048	+	yafQ	b0225	0.31	+0.1
246,048	+	yafQ	b0225	0.31	-0.2
246,086	-	yafQ	b0225	0.45	+0.3
246,086	-	yafQ	b0225	0.45	+1.1
246,086	-	yafQ	b0225	0.45	+0.7
246,086	-	yafQ	b0225	0.45	+0.7