Strain Fitness in Escherichia coli BW25113 around b3456

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
3,591,252	+	livF	b3454	0.71	+0.3
3,591,252	+	livF	b3454	0.71	+0.1
3,591,381	-	livF	b3454	0.89	+0.1
3,591,381	-	livF	b3454	0.89	+0.6
3,591,419	-				+0.2
3,591,479	-				-0.8
3,591,479	-				+0.3
3,591,547	-	livG	b3455	0.11	+0.5
3,591,584	+	livG	b3455	0.16	+0.2
3,591,592	-	livG	b3455	0.17	+1.2
3,591,748	-	livG	b3455	0.37	+0.3
3,591,748	-	livG	b3455	0.37	+0.2
3,591,748	-	livG	b3455	0.37	-0.7
3,591,765	+	livG	b3455	0.39	+0.7
3,591,768	-	livG	b3455	0.40	+0.7
3,591,834	+	livG	b3455	0.48	+0.4
3,591,834	+	livG	b3455	0.48	+0.3
3,591,881	+	livG	b3455	0.55	+1.2
3,591,907	+	livG	b3455	0.58	+0.3
3,591,937	-	livG	b3455	0.62	-0.4
3,591,943	-	livG	b3455	0.63	-0.1
3,591,962	-	livG	b3455	0.65	+0.2
3,591,974	-	livG	b3455	0.67	-1.1
3,592,053	+	livG	b3455	0.77	+0.5
3,592,148	-	livG	b3455	0.89	+0.6
3,592,229	+				-0.2
3,592,321	-				-0.2
3,592,436	+	livM	b3456	0.16	+0.7
3,592,436	+	livM	b3456	0.16	+0.6
3,592,590	-	livM	b3456	0.28	+0.3
3,592,640	+	livM	b3456	0.32	+0.1
3,592,763	+	livM	b3456	0.42	+0.6
3,592,763	+	livM	b3456	0.42	+0.7
3,592,768	+	livM	b3456	0.42	+0.1
3,592,768	+	livM	b3456	0.42	+0.7
3,592,822	+	livM	b3456	0.47	+0.1
3,592,822	+	livM	b3456	0.47	+0.7
3,592,834	+	livM	b3456	0.48	+0.1
3,593,081	+	livM	b3456	0.67	+0.5
3,593,081	+	livM	b3456	0.67	+0.8
3,593,103	-	livM	b3456	0.69	+0.0
3,593,103	-	livM	b3456	0.69	+0.2
3,593,139	+	livM	b3456	0.71	+0.5
3,593,210	+	livM	b3456	0.77	+0.3
3,593,210	+	livM	b3456	0.77	-0.0
3,593,244	+	livM	b3456	0.80	+0.4
3,593,339	+	livM	b3456	0.87	+0.1
3,593,375	-	livM	b3456	0.90	+0.8
3,593,383	-				+0.6
3,593,383	-				+0.4
3,593,401	+				+0.2
3,593,409	-				+0.8
3,593,424	-				+0.6
3,593,438	-				+0.4
3,593,438	-				+0.1
3,593,524	+				+0.5
3,593,620	-	livH	b3457	0.13	-0.1
3,593,620	-	livH	b3457	0.13	+0.8
3,593,655	-	livH	b3457	0.17	-0.1
3,593,655	-	livH	b3457	0.17	+0.6
3,593,655	-	livH	b3457	0.17	+0.3
3,593,655	-	livH	b3457	0.17	+0.3
3,593,660	+	livH	b3457	0.17	+0.3
3,593,660	+	livH	b3457	0.17	+0.5
3,593,749	+	livH	b3457	0.27	+0.4
3,593,825	+	livH	b3457	0.35	-0.2
3,593,833	-	livH	b3457	0.36	+0.1
3,593,869	+	livH	b3457	0.40	-0.0
3,593,942	+	livH	b3457	0.48	+0.8
3,593,942	+	livH	b3457	0.48	+0.7
3,593,966	-	livH	b3457	0.50	+0.3
3,594,055	-	livH	b3457	0.60	+0.5
3,594,098	-	livH	b3457	0.65	+0.3
3,594,150	+	livH	b3457	0.70	+0.4
3,594,150	+	livH	b3457	0.70	-0.1
3,594,220	+	livH	b3457	0.78	+0.1
3,594,232	-	livH	b3457	0.79	-0.8
3,594,232	-	livH	b3457	0.79	+0.6
3,594,236	+	livH	b3457	0.79	+1.3
3,594,236	+	livH	b3457	0.79	+0.2
3,594,346	-				+0.1
3,594,350	-				-0.8
3,594,350	-				+0.6
3,594,404	-				+0.5
3,594,404	-				+0.3
3,594,417	+				+0.4
3,594,469	+				+0.9
3,594,485	-				-0.2