Strain Fitness in Escherichia coli BW25113 around b3164

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
3,306,073	-				-0.1
3,306,103	-				-0.6
3,306,171	+	nlpI	b3163	0.12	-0.9
3,306,189	-	nlpI	b3163	0.14	-0.9
3,306,189	-	nlpI	b3163	0.14	-1.1
3,306,192	-	nlpI	b3163	0.15	+0.8
3,306,216	-	nlpI	b3163	0.17	-0.7
3,306,275	-	nlpI	b3163	0.24	-1.1
3,306,275	-	nlpI	b3163	0.24	-1.0
3,306,640	-	nlpI	b3163	0.65	-0.7
3,306,640	-	nlpI	b3163	0.65	-0.4
3,306,652	-	nlpI	b3163	0.67	-1.7
3,306,676	+	nlpI	b3163	0.69	-0.3
3,306,712	+	nlpI	b3163	0.73	-0.6
3,306,728	+	nlpI	b3163	0.75	-0.6
3,306,729	+	nlpI	b3163	0.75	-2.0
3,306,855	-	nlpI	b3163	0.90	-1.3
3,307,056	+				-1.9
3,307,056	+				-2.3
3,307,069	-				+1.0
3,307,069	-				+2.2
3,307,074	-				+0.3
3,307,095	-				+0.0
3,307,117	+				+2.4
3,307,200	-				+1.1
3,307,247	-				+2.3
3,307,279	-	pnp	b3164	0.10	+0.7
3,307,314	-	pnp	b3164	0.12	+1.6
3,307,354	-	pnp	b3164	0.14	+1.3
3,307,359	-	pnp	b3164	0.14	+1.4
3,307,371	-	pnp	b3164	0.15	+1.7
3,307,471	-	pnp	b3164	0.19	+2.2
3,309,216	-				-1.1
3,309,239	-				+0.2
3,309,437	-				-0.1
3,309,823	-				+0.1
3,309,823	-				+0.4
3,309,838	-				-0.8
3,309,987	-	truB	b3166	0.14	+0.1
3,309,990	-	truB	b3166	0.14	+0.6
3,310,065	+	truB	b3166	0.22	+1.3
3,310,085	-	truB	b3166	0.24	+0.1
3,310,126	+	truB	b3166	0.29	+0.1
3,310,148	+	truB	b3166	0.31	+0.1
3,310,148	+	truB	b3166	0.31	+0.0