Strain Fitness in Escherichia coli BW25113 around b2939

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
3,083,018	+	speA	b2938	0.54	+1.5
3,083,040	+	speA	b2938	0.55	-0.7
3,083,040	+	speA	b2938	0.55	+0.5
3,083,045	+	speA	b2938	0.55	+0.3
3,083,045	+	speA	b2938	0.55	+0.0
3,083,142	+	speA	b2938	0.60	-0.2
3,083,142	+	speA	b2938	0.60	-1.5
3,083,287	-	speA	b2938	0.67	-0.6
3,083,287	-	speA	b2938	0.67	+0.2
3,083,305	+	speA	b2938	0.68	-1.4
3,083,305	+	speA	b2938	0.68	-0.0
3,083,361	+	speA	b2938	0.71	+1.2
3,083,361	+	speA	b2938	0.71	+0.8
3,083,365	-	speA	b2938	0.71	-0.2
3,083,365	-	speA	b2938	0.71	+1.0
3,083,408	+	speA	b2938	0.73	-0.2
3,083,416	-	speA	b2938	0.74	-0.5
3,083,440	-	speA	b2938	0.75	-0.0
3,083,440	-	speA	b2938	0.75	+0.6
3,083,452	-	speA	b2938	0.76	+0.2
3,083,452	-	speA	b2938	0.76	+0.4
3,083,462	-	speA	b2938	0.76	-0.0
3,083,575	-	speA	b2938	0.82	+0.6
3,083,575	-	speA	b2938	0.82	+1.0
3,083,618	-	speA	b2938	0.84	+0.7
3,083,677	-	speA	b2938	0.87	-0.2
3,083,693	+	speA	b2938	0.88	+0.3
3,083,693	+	speA	b2938	0.88	+0.7
3,083,761	-				-0.0
3,083,772	-				-0.9
3,083,802	-				-0.1
3,083,823	+				-0.1
3,083,834	-				-0.5
3,083,834	-				-0.1
3,083,872	+				+0.2
3,083,874	+				+0.8
3,083,880	-				+0.3
3,083,880	-				-0.0
3,083,911	+				+0.4
3,083,985	+	yqgB	b2939	0.33	+0.1
3,084,042	+	yqgB	b2939	0.76	-0.8
3,084,150	-				-0.3
3,084,153	+				-0.0
3,084,166	-				-0.1
3,084,181	-				+0.3
3,084,227	+				+0.6
3,084,242	+	yqgC	b2940	0.15	-0.2
3,084,259	-	yqgC	b2940	0.23	+0.3
3,084,259	-	yqgC	b2940	0.23	+0.2
3,084,259	-	yqgC	b2940	0.23	-0.3
3,084,285	-	yqgC	b2940	0.35	+0.4
3,084,345	-	yqgC	b2940	0.63	+0.4
3,084,471	+				-0.2
3,084,632	+				-0.0
3,084,632	+				+0.1