Strain Fitness in Escherichia coli BW25113 around b2752

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
2,872,478	-	cysN	b2751	0.32	-2.1
2,872,760	+	cysN	b2751	0.52	-0.5
2,872,768	-	cysN	b2751	0.53	-1.6
2,872,768	-	cysN	b2751	0.53	-1.4
2,872,963	+	cysN	b2751	0.66	-1.0
2,872,965	+	cysN	b2751	0.67	-1.2
2,872,971	-	cysN	b2751	0.67	-1.8
2,873,014	+	cysN	b2751	0.70	-1.5
2,873,085	-	cysN	b2751	0.75	-0.8
2,873,093	+	cysN	b2751	0.76	-1.8
2,873,179	-	cysN	b2751	0.82	-1.1
2,873,260	+	cysN	b2751	0.87	-1.1
2,873,472	+				-1.0
2,873,480	-				-1.4
2,873,480	-				-1.7
2,873,480	-				-1.2
2,873,614	+	cysD	b2752	0.19	-1.4
2,873,773	+	cysD	b2752	0.36	-0.5
2,873,773	+	cysD	b2752	0.36	-1.8
2,873,837	+	cysD	b2752	0.43	-1.1
2,873,951	-	cysD	b2752	0.56	-1.0
2,873,951	-	cysD	b2752	0.56	-2.2
2,873,953	+	cysD	b2752	0.56	-1.4
2,874,048	+	cysD	b2752	0.67	-1.0
2,874,225	-	cysD	b2752	0.86	-1.7
2,874,306	+				-1.3
2,874,325	-				-1.8
2,874,330	-				-1.6
2,874,343	-				-2.2
2,874,362	+				-2.1
2,874,362	+				-1.1
2,874,367	-				+0.1
2,874,394	-				+0.1
2,874,394	-				-0.4
2,874,399	+				-2.1
2,874,399	+				-1.2
2,874,399	+				-1.5
2,874,399	+				-2.0
2,874,407	-				+0.5
2,874,407	-				+0.2
2,874,407	-				-0.3
2,874,435	+				-2.2
2,874,459	+				+0.9
2,874,499	-				+0.4
2,874,500	+				+0.4
2,874,561	-				+0.4
2,874,561	-				-0.7
2,874,562	-				+1.2
2,874,586	+				+0.7
2,874,620	+				-0.9
2,874,622	+				-0.2
2,874,623	+				+0.1
2,874,623	+				+0.2
2,874,623	+				+0.3
2,874,623	+				+0.1
2,874,628	+				+0.1
2,874,628	-				+1.1
2,874,631	-				-0.5
2,874,631	-				-0.2
2,874,638	+				-0.1
2,874,641	-				-0.7
2,874,641	-				+0.1
2,874,641	-				+0.3
2,874,658	-				+0.7
2,874,666	+				-0.1
2,874,706	-				-0.3
2,874,709	+	iap	b2753	0.10	+0.0
2,874,747	+	iap	b2753	0.14	-0.4
2,874,747	+	iap	b2753	0.14	+0.8
2,874,751	-	iap	b2753	0.14	+0.2
2,874,755	-	iap	b2753	0.15	+0.0
2,874,755	-	iap	b2753	0.15	-1.0
2,874,764	+	iap	b2753	0.16	+0.4
2,874,764	+	iap	b2753	0.16	-0.2
2,874,784	-	iap	b2753	0.17	+0.2
2,874,841	+	iap	b2753	0.23	-0.1
2,874,841	+	iap	b2753	0.23	+0.3
2,874,845	+	iap	b2753	0.23	+0.5
2,874,845	+	iap	b2753	0.23	-0.9
2,874,853	-	iap	b2753	0.24	-0.4
2,874,866	+	iap	b2753	0.25	+0.1
2,874,878	+	iap	b2753	0.26	-0.2
2,874,903	-	iap	b2753	0.29	+0.2
2,874,915	-	iap	b2753	0.30	+1.0
2,874,937	+	iap	b2753	0.32	-0.1
2,874,937	+	iap	b2753	0.32	-0.1
2,874,946	-	iap	b2753	0.33	+0.2
2,874,961	-	iap	b2753	0.34	+0.6
2,874,968	-	iap	b2753	0.35	+0.5
2,874,969	+	iap	b2753	0.35	-0.1
2,875,012	+	iap	b2753	0.39	+0.8
2,875,012	+	iap	b2753	0.39	+0.5
2,875,020	-	iap	b2753	0.40	-0.1
2,875,021	+	iap	b2753	0.40	-0.0
2,875,026	+	iap	b2753	0.41	-0.0
2,875,026	+	iap	b2753	0.41	-0.8
2,875,041	+	iap	b2753	0.42	-0.0
2,875,053	+	iap	b2753	0.43	-0.1
2,875,081	-	iap	b2753	0.46	-0.0
2,875,094	+	iap	b2753	0.47	-0.4
2,875,094	+	iap	b2753	0.47	+0.3
2,875,097	-	iap	b2753	0.48	+0.3
2,875,105	+	iap	b2753	0.48	+0.1
2,875,146	+	iap	b2753	0.52	-0.0
2,875,189	+	iap	b2753	0.56	+0.4
2,875,214	-	iap	b2753	0.59	+0.4
2,875,224	-				-1.1
2,875,321	+	iap	b2753	0.69	+0.2
2,875,321	+	iap	b2753	0.69	+0.0
2,875,321	+	iap	b2753	0.69	-0.2
2,875,321	+	iap	b2753	0.69	+0.6
2,875,321	+	iap	b2753	0.69	-0.6