Strain Fitness in Escherichia coli BW25113 around b2346

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
2,462,184	-				+1.5
2,462,208	-				+1.5
2,462,252	-				-0.6
2,462,309	-				+0.2
2,462,309	-				+0.3
2,462,309	-				+0.7
2,462,309	-				+0.1
2,462,333	-				+0.4
2,462,336	-				+0.5
2,462,344	-				-0.1
2,462,344	-				-0.2
2,462,394	-	vacJ	b2346	0.16	+0.7
2,462,399	-	vacJ	b2346	0.17	+0.8
2,462,403	-	vacJ	b2346	0.17	+0.3
2,462,405	-	vacJ	b2346	0.17	+0.3
2,462,406	-	vacJ	b2346	0.17	+0.6
2,462,421	-	vacJ	b2346	0.19	+0.2
2,462,438	-	vacJ	b2346	0.22	+0.1
2,462,447	+	vacJ	b2346	0.23	+2.5
2,462,465	+	vacJ	b2346	0.25	+0.5
2,462,471	-	vacJ	b2346	0.26	+0.4
2,462,491	-	vacJ	b2346	0.29	+0.4
2,462,507	-	vacJ	b2346	0.31	+0.1
2,462,619	+	vacJ	b2346	0.46	-0.3
2,462,619	+	vacJ	b2346	0.46	+0.1
2,462,623	+	vacJ	b2346	0.46	+1.4
2,462,708	-	vacJ	b2346	0.57	+0.1
2,462,799	-	vacJ	b2346	0.69	+0.2
2,462,878	+	vacJ	b2346	0.80	+0.4
2,462,909	+	vacJ	b2346	0.84	+2.5
2,462,913	-	vacJ	b2346	0.85	+0.7
2,463,052	+				+0.1
2,463,052	+				+0.1
2,463,126	+				-0.2
2,463,170	+				+0.1
2,463,186	+				-0.5
2,463,194	-				-0.0
2,463,365	-				-0.3
2,463,415	-				+0.4
2,463,431	-	yfdC	b2347	0.12	-0.1
2,463,473	+	yfdC	b2347	0.16	+0.3
2,463,568	-	yfdC	b2347	0.26	+0.6
2,463,568	-	yfdC	b2347	0.26	-0.3
2,463,648	-	yfdC	b2347	0.35	+0.3
2,463,683	+	yfdC	b2347	0.39	-0.6
2,463,728	+	yfdC	b2347	0.43	-0.5
2,463,736	+	yfdC	b2347	0.44	-0.0
2,463,736	+	yfdC	b2347	0.44	-0.3
2,463,777	+	yfdC	b2347	0.49	-1.7
2,463,807	-	yfdC	b2347	0.52	-1.1
2,463,807	-	yfdC	b2347	0.52	-0.1
2,463,811	+	yfdC	b2347	0.52	+0.1
2,463,855	-	yfdC	b2347	0.57	-0.1
2,463,858	+	yfdC	b2347	0.57	-0.1
2,463,858	+	yfdC	b2347	0.57	+0.4
2,463,861	-	yfdC	b2347	0.58	+1.5
2,463,861	-	yfdC	b2347	0.58	+0.0
2,463,868	-	yfdC	b2347	0.58	+0.5
2,463,926	-	yfdC	b2347	0.65	-0.2
2,463,980	+	yfdC	b2347	0.70	-0.0
2,463,984	+	yfdC	b2347	0.71	+0.3
2,463,997	+	yfdC	b2347	0.72	+0.0
2,464,005	-	yfdC	b2347	0.73	-1.2
2,464,005	-	yfdC	b2347	0.73	-0.4
2,464,007	+	yfdC	b2347	0.73	+0.1