Strain Fitness in Escherichia coli BW25113 around b2276

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
2,387,214	+				+1.5
2,387,237	+	yfbP	b2275	0.12	+0.3
2,387,245	-	yfbP	b2275	0.13	+0.5
2,387,266	+	yfbP	b2275	0.15	-0.3
2,387,266	+	yfbP	b2275	0.15	-0.5
2,387,269	-	yfbP	b2275	0.15	-1.5
2,387,280	+	yfbP	b2275	0.17	-1.9
2,387,294	-	yfbP	b2275	0.18	-0.3
2,387,297	+	yfbP	b2275	0.19	-0.0
2,387,354	+	yfbP	b2275	0.25	+2.7
2,387,512	+	yfbP	b2275	0.44	-0.3
2,387,545	-	yfbP	b2275	0.48	+0.8
2,387,600	-	yfbP	b2275	0.54	-0.3
2,387,600	-	yfbP	b2275	0.54	-0.6
2,387,640	+	yfbP	b2275	0.59	-0.1
2,387,640	+	yfbP	b2275	0.59	-0.0
2,387,671	+	yfbP	b2275	0.63	+0.9
2,387,675	+	yfbP	b2275	0.63	-0.2
2,387,677	+	yfbP	b2275	0.63	-0.5
2,387,687	-	yfbP	b2275	0.65	+0.2
2,387,687	-	yfbP	b2275	0.65	-0.0
2,387,791	+	yfbP	b2275	0.77	+0.4
2,387,843	-	yfbP	b2275	0.83	-0.4
2,387,845	+	yfbP	b2275	0.83	-0.1
2,387,853	-	yfbP	b2275	0.84	-0.0
2,387,981	+				+0.4
2,387,981	+				+0.3
2,387,993	+				+0.0
2,388,014	-				-0.1
2,388,014	-				-0.0
2,388,125	-				-0.4
2,388,131	-				-0.6
2,388,131	-				+0.4
2,388,152	-				-0.7
2,388,187	+				-0.4
2,388,260	-	nuoN	b2276	0.13	-0.9
2,388,314	+	nuoN	b2276	0.17	-1.0
2,388,315	+	nuoN	b2276	0.17	-1.2
2,388,320	+	nuoN	b2276	0.17	-0.4
2,388,482	+	nuoN	b2276	0.28	-2.2
2,388,482	+	nuoN	b2276	0.28	-0.9
2,388,545	+	nuoN	b2276	0.33	-0.8
2,388,665	-	nuoN	b2276	0.41	-1.1
2,388,762	-	nuoN	b2276	0.47	-2.0
2,388,773	-	nuoN	b2276	0.48	+0.6
2,388,835	+	nuoN	b2276	0.52	+0.7
2,388,999	-	nuoN	b2276	0.64	+0.0
2,389,002	+	nuoN	b2276	0.64	-0.2
2,389,005	-	nuoN	b2276	0.64	+0.2
2,389,005	-	nuoN	b2276	0.64	-1.0
2,389,007	+	nuoN	b2276	0.64	-1.5
2,389,258	-	nuoN	b2276	0.81	-0.9
2,389,295	-	nuoN	b2276	0.84	-0.2
2,389,306	-	nuoN	b2276	0.85	-0.7
2,389,306	-	nuoN	b2276	0.85	-0.3
2,389,442	+				-0.9
2,389,461	-				-0.8
2,389,517	+				-0.2
2,389,539	+				-1.4
2,389,787	-	nuoM	b2277	0.17	-2.1
2,389,817	-	nuoM	b2277	0.18	-0.1
2,389,843	-	nuoM	b2277	0.20	+0.2
2,389,938	-	nuoM	b2277	0.26	-1.0
2,389,972	-	nuoM	b2277	0.29	+0.5
2,390,000	-	nuoM	b2277	0.30	-0.8
2,390,028	-	nuoM	b2277	0.32	-1.4
2,390,028	-	nuoM	b2277	0.32	-0.7
2,390,151	-	nuoM	b2277	0.40	-1.0
2,390,151	-	nuoM	b2277	0.40	-1.5
2,390,162	+	nuoM	b2277	0.41	-0.3
2,390,162	+	nuoM	b2277	0.41	-0.6
2,390,162	+	nuoM	b2277	0.41	-1.2
2,390,170	-	nuoM	b2277	0.42	-1.4
2,390,211	+	nuoM	b2277	0.44	+0.3
2,390,230	-	nuoM	b2277	0.45	-0.4
2,390,312	+	nuoM	b2277	0.51	-0.4
2,390,341	+	nuoM	b2277	0.53	-0.0
2,390,383	-	nuoM	b2277	0.55	+1.3
2,390,411	+	nuoM	b2277	0.57	-0.0
2,390,426	-	nuoM	b2277	0.58	-0.1
2,390,454	-	nuoM	b2277	0.60	-0.5
2,390,511	-	nuoM	b2277	0.64	-0.4
2,390,516	-	nuoM	b2277	0.64	-1.4
2,390,516	-	nuoM	b2277	0.64	-1.9
2,390,522	-				+0.7
2,390,522	-	nuoM	b2277	0.65	+0.6