Strain Fitness in Escherichia coli BW25113 around b2064

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
2,136,836	+	yegH	b2063	0.57	+0.2
2,136,865	-	yegH	b2063	0.59	-0.3
2,136,940	+	yegH	b2063	0.64	+0.8
2,137,000	-	yegH	b2063	0.68	+1.1
2,137,000	-	yegH	b2063	0.68	-0.0
2,137,023	-	yegH	b2063	0.69	+0.4
2,137,147	+	yegH	b2063	0.77	+0.1
2,137,264	-	yegH	b2063	0.84	+0.5
2,137,290	-	yegH	b2063	0.86	+0.3
2,137,305	-	yegH	b2063	0.87	+0.4
2,137,305	-	yegH	b2063	0.87	-0.4
2,137,355	+				+0.2
2,137,368	+				-0.2
2,137,451	-				-0.1
2,137,471	-				+0.7
2,137,617	-				+0.5
2,137,618	+				+0.0
2,137,618	+				+0.0
2,137,653	-				-0.1
2,137,688	+				-0.1
2,137,764	+				-0.0
2,137,767	-				+0.4
2,137,789	-				-0.2
2,137,844	+				-0.4
2,137,881	-				+0.1
2,137,881	-				+0.6
2,137,934	-				+0.0
2,137,934	-				-0.8
2,137,937	+				-0.7
2,137,944	-				-0.1
2,137,953	+				+0.6
2,137,953	+				-0.7
2,138,077	-	asmA	b2064	0.16	+0.1
2,138,115	-	asmA	b2064	0.18	+0.1
2,138,212	+	asmA	b2064	0.23	-1.3
2,138,230	-	asmA	b2064	0.24	+0.1
2,138,243	-	asmA	b2064	0.25	-0.7
2,138,328	-	asmA	b2064	0.29	-1.5
2,138,328	-	asmA	b2064	0.29	-1.6
2,138,347	-	asmA	b2064	0.30	-0.2
2,138,402	-	asmA	b2064	0.33	-1.0
2,138,402	-	asmA	b2064	0.33	+1.1
2,138,511	-	asmA	b2064	0.39	-1.1
2,138,594	-	asmA	b2064	0.44	-1.8
2,138,599	-	asmA	b2064	0.44	-0.7
2,138,599	-	asmA	b2064	0.44	+0.8
2,138,758	-	asmA	b2064	0.53	-0.9
2,138,820	+	asmA	b2064	0.56	-1.3
2,138,829	+	asmA	b2064	0.56	-1.9
2,138,849	-	asmA	b2064	0.57	-1.2
2,138,959	-	asmA	b2064	0.63	-1.6
2,139,025	+	asmA	b2064	0.67	-1.3
2,139,052	+	asmA	b2064	0.68	-1.2
2,139,108	-	asmA	b2064	0.71	-1.7
2,139,191	-	asmA	b2064	0.76	-0.8
2,139,272	-	asmA	b2064	0.80	-2.0
2,139,299	+	asmA	b2064	0.82	-1.4
2,139,366	-	asmA	b2064	0.85	-1.2
2,139,390	-	asmA	b2064	0.87	-1.4
2,139,416	-	asmA	b2064	0.88	-1.4
2,139,457	-				-1.6
2,139,457	-				-1.8
2,139,516	-				-2.1
2,139,521	-				-1.2
2,139,521	-				-1.8
2,139,530	+				-1.7
2,139,574	+				-1.1
2,139,574	+				-1.1
2,139,640	+				-0.5
2,140,303	+				-0.0
2,140,303	+				+0.5
2,140,303	+				-0.3
2,140,311	-				+0.3
2,140,363	+				-0.4
2,140,494	-				+0.4
2,140,494	-	udk	b2066	0.25	+0.0
2,140,505	+	udk	b2066	0.27	+0.2