Strain Fitness in Escherichia coli BW25113 around b2021

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
2,089,504	+	hisD	b2020	0.29	-2.9
2,089,605	-	hisD	b2020	0.37	-2.6
2,089,755	-	hisD	b2020	0.49	-2.8
2,089,776	+	hisD	b2020	0.50	-2.4
2,089,844	+	hisD	b2020	0.55	-2.5
2,089,929	-	hisD	b2020	0.62	-3.2
2,089,929	-	hisD	b2020	0.62	-2.4
2,090,018	-	hisD	b2020	0.69	-1.1
2,090,018	-	hisD	b2020	0.69	-2.5
2,090,075	-	hisD	b2020	0.73	-1.6
2,090,124	+	hisD	b2020	0.77	-3.0
2,090,124	+	hisD	b2020	0.77	-3.1
2,090,132	-	hisD	b2020	0.77	-2.4
2,090,300	-				-2.2
2,090,337	-				-1.9
2,090,419	+				-0.0
2,090,721	-	hisC	b2021	0.28	-1.3
2,090,808	-	hisC	b2021	0.36	-3.6
2,090,932	+	hisC	b2021	0.48	-2.2
2,090,932	+	hisC	b2021	0.48	-2.0
2,090,938	+	hisC	b2021	0.48	-3.7
2,091,102	+	hisC	b2021	0.63	-2.5
2,091,202	-	hisC	b2021	0.73	-1.1
2,091,202	-	hisC	b2021	0.73	-1.8
2,091,274	+	hisC	b2021	0.80	-3.8
2,091,351	+	hisC	b2021	0.87	-2.7
2,091,593	-				-0.4
2,091,593	-				-0.4
2,091,619	-	hisB	b2022	0.12	-1.7
2,091,659	+	hisB	b2022	0.16	-2.2
2,091,985	-	hisB	b2022	0.46	-1.6
2,092,013	-	hisB	b2022	0.49	-2.2
2,092,013	-	hisB	b2022	0.49	-2.4
2,092,070	+	hisB	b2022	0.54	-3.2
2,092,080	+	hisB	b2022	0.55	-2.2
2,092,114	-	hisB	b2022	0.58	-1.7
2,092,160	+	hisB	b2022	0.63	-1.7
2,092,171	-	hisB	b2022	0.64	-1.3
2,092,193	-	hisB	b2022	0.66	-2.2
2,092,193	-	hisB	b2022	0.66	-0.6
2,092,355	+	hisB	b2022	0.81	-2.3
2,092,355	+	hisB	b2022	0.81	-2.2
2,092,359	-	hisB	b2022	0.81	-1.9
2,092,406	+	hisB	b2022	0.86	-0.3
2,092,406	+	hisB	b2022	0.86	-2.7
2,092,412	+	hisB	b2022	0.86	-2.3
2,092,412	+	hisB	b2022	0.86	-2.4
2,092,464	+				-2.4