Strain Fitness in Escherichia coli BW25113 around b2019

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
2,087,364	-	yoeB	b4539	0.51	+0.2
2,087,506	-				-0.3
2,087,506	-				+0.5
2,087,544	+	yefM	b2017	0.23	-0.0
2,087,642	-	yefM	b2017	0.62	+0.6
2,087,867	+				+0.2
2,088,113	-				-0.7
2,088,203	-				-1.4
2,088,203	-				-1.2
2,088,316	+	hisG	b2019	0.11	-1.7
2,088,484	-	hisG	b2019	0.30	-2.7
2,088,602	+	hisG	b2019	0.43	-2.2
2,088,610	-	hisG	b2019	0.44	-2.7
2,088,610	-	hisG	b2019	0.44	-1.8
2,088,657	-	hisG	b2019	0.49	-3.2
2,088,681	-	hisG	b2019	0.52	-1.9
2,088,859	+	hisG	b2019	0.71	-0.5
2,088,900	+	hisG	b2019	0.76	-1.0
2,088,900	+	hisG	b2019	0.76	-2.4
2,089,029	+				-2.0
2,089,104	+				-2.7
2,089,133	-				-2.1
2,089,155	-				-2.6
2,089,187	-				-2.2
2,089,234	-				-1.5
2,089,234	-				-3.0
2,089,267	+	hisD	b2020	0.11	-1.6
2,089,326	+	hisD	b2020	0.16	-1.7
2,089,419	-	hisD	b2020	0.23	-2.7
2,089,504	+	hisD	b2020	0.29	-2.9
2,089,605	-	hisD	b2020	0.37	-2.6
2,089,755	-	hisD	b2020	0.49	-2.8
2,089,776	+	hisD	b2020	0.50	-2.4
2,089,844	+	hisD	b2020	0.55	-2.5
2,089,929	-	hisD	b2020	0.62	-3.2
2,089,929	-	hisD	b2020	0.62	-2.4
2,090,018	-	hisD	b2020	0.69	-1.1
2,090,018	-	hisD	b2020	0.69	-2.5
2,090,075	-	hisD	b2020	0.73	-1.6