Strain Fitness in Escherichia coli BW25113 around b1548

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
1,632,995	+				+0.5
1,633,092	-	stfQ	b1547	0.19	-0.3
1,633,234	+	stfQ	b1547	0.34	+0.2
1,633,234	+	stfQ	b1547	0.34	-0.1
1,633,282	-	stfQ	b1547	0.39	-0.1
1,633,282	-	stfQ	b1547	0.39	+0.4
1,633,282	-	stfQ	b1547	0.39	-1.2
1,633,716	+	stfQ	b1547	0.84	+0.3
1,633,724	-	stfQ	b1547	0.85	-0.2
1,633,724	-	stfQ	b1547	0.85	-0.1
1,633,829	-				-0.5
1,634,153	+	nohA	b1548	0.55	+0.6
1,634,153	+	nohA	b1548	0.55	+0.5
1,634,884	+	ynfO	b4533	0.44	+0.2
1,634,884	+	ynfO	b4533	0.44	+0.2
1,634,916	+	ynfO	b4533	0.58	+0.9
1,634,916	+	ynfO	b4533	0.58	-0.2