Strain Fitness in Escherichia coli BW25113 around b1358
Experiment: Ying_OrganicAcid7 rep C; time point 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_OrganicAcid7 rep C; time point 1 |
---|---|---|---|---|---|
remove | |||||
1,418,573 | - | ydaS | b1357 | 0.62 | -0.5 |
1,418,619 | - | ydaS | b1357 | 0.77 | -0.7 |
1,418,746 | - | +0.0 | |||
1,418,848 | - | ydaT | b1358 | 0.33 | +0.9 |
1,418,848 | - | ydaT | b1358 | 0.33 | +0.2 |
1,419,186 | + | +0.2 | |||
1,419,186 | + | +0.1 | |||
1,419,235 | - | ydaU | b1359 | 0.11 | -0.1 |
1,419,360 | - | ydaU | b1359 | 0.25 | +0.4 |
1,419,393 | - | ydaU | b1359 | 0.29 | +0.8 |
1,419,393 | - | ydaU | b1359 | 0.29 | +0.4 |
1,419,797 | + | ydaU | b1359 | 0.76 | +0.1 |
1,419,910 | + | ydaU | b1359 | 0.89 | -0.4 |
1,419,933 | - | +0.1 | |||
1,419,988 | - | +1.3 | |||
1,420,068 | - | -0.1 |
Or see this region's nucleotide sequence