Strain Fitness in Escherichia coli BW25113 around b1291

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
1,349,963	-	sapF	b1290	0.14	+0.2
1,350,108	+	sapF	b1290	0.32	-1.1
1,350,244	+	sapF	b1290	0.49	-0.1
1,350,286	+	sapF	b1290	0.54	-1.8
1,350,294	-	sapF	b1290	0.55	+0.1
1,350,550	+	sapF	b1290	0.86	+1.3
1,350,656	-				+0.3
1,350,749	+				-1.5
1,350,855	+	sapD	b1291	0.20	-1.5
1,350,861	+	sapD	b1291	0.20	-1.8
1,350,997	-	sapD	b1291	0.34	-0.4
1,351,021	-	sapD	b1291	0.36	-2.4
1,351,342	-	sapD	b1291	0.69	-1.2
1,351,739	-				+1.1
1,352,074	-	sapC	b1292	0.47	-1.8
1,352,113	+	sapC	b1292	0.52	-0.8
1,352,173	+	sapC	b1292	0.58	-2.3
1,352,173	+	sapC	b1292	0.58	-1.4
1,352,254	+	sapC	b1292	0.68	-1.4
1,352,290	-	sapC	b1292	0.72	-1.8
1,352,351	-	sapC	b1292	0.78	-0.1
1,352,438	+	sapC	b1292	0.88	+1.7