Strain Fitness in Escherichia coli BW25113 around b1194

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
1,242,033	+	ldcA	b1192	0.70	-2.9
1,242,208	-	ldcA	b1192	0.90	-1.1
1,242,237	-				-2.2
1,242,284	+				-2.6
1,242,305	-				-1.4
1,242,337	+				+0.0
1,242,355	-				-0.2
1,242,365	-				-0.2
1,242,365	-				+0.1
1,242,465	+	mltE	b1193	0.10	+0.7
1,242,655	+	mltE	b1193	0.41	+1.2
1,243,159	+	ycgR	b1194	0.19	+0.6
1,243,291	-	ycgR	b1194	0.37	-0.1
1,243,291	-	ycgR	b1194	0.37	+1.0
1,243,521	+	ycgR	b1194	0.69	+0.0
1,243,589	+	ycgR	b1194	0.78	-0.2
1,243,637	-	ycgR	b1194	0.84	+1.2
1,243,688	+				+0.2
1,243,722	-				+0.7
1,243,732	+				+1.1
1,243,798	+				-0.5
1,243,864	+				-0.2
1,243,875	+				+0.4
1,243,890	+				+0.0
1,243,893	-				+0.1
1,243,899	+				-0.3
1,243,904	+				-0.5
1,244,024	-	ymgE	b1195	0.29	-1.7
1,244,060	-	ymgE	b1195	0.43	-1.1
1,244,118	+	ymgE	b1195	0.65	+0.5
1,244,160	+	ymgE	b1195	0.82	+0.0
1,244,160	+	ymgE	b1195	0.82	+0.6
1,244,164	+	ymgE	b1195	0.84	+0.7
1,244,225	+				-0.2
1,244,225	+				+0.1
1,244,225	+				-0.1
1,244,238	+				+0.0
1,244,262	+				+0.2
1,244,267	+				-1.5
1,244,328	+				+0.4
1,244,328	+				+0.1
1,244,328	+				-2.2
1,244,336	-				-0.7
1,244,336	-				-1.0
1,244,417	+				-0.3
1,244,430	-	ycgY	b1196	0.11	+0.2
1,244,451	+	ycgY	b1196	0.15	-0.8
1,244,603	-	ycgY	b1196	0.50	+0.7
1,244,645	+	ycgY	b1196	0.59	+2.3
1,244,677	-	ycgY	b1196	0.67	+0.1
1,244,681	-	ycgY	b1196	0.68	+1.3
1,244,685	+	ycgY	b1196	0.68	-2.1
1,244,685	+	ycgY	b1196	0.68	+0.2