Strain Fitness in Escherichia coli BW25113 around b1188

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
1,234,004	-				+0.1
1,234,099	-				+0.3
1,234,102	+				+0.6
1,234,112	+				-0.2
1,234,114	+				-0.6
1,234,118	-				-0.2
1,234,118	-				-0.5
1,234,157	+				-0.8
1,234,222	+				+0.3
1,234,299	+	fadR	b1187	0.19	+0.2
1,234,317	-	fadR	b1187	0.22	+0.2
1,234,331	+	fadR	b1187	0.24	+0.8
1,234,436	-				+0.1
1,234,565	+	fadR	b1187	0.56	+0.7
1,234,673	+	fadR	b1187	0.71	+1.0
1,234,681	-	fadR	b1187	0.72	+0.4
1,234,720	+	fadR	b1187	0.78	+0.5
1,234,807	+	fadR	b1187	0.90	+0.2
1,234,807	+	fadR	b1187	0.90	+0.6
1,234,815	-				+1.6
1,234,889	-				+0.0
1,234,989	+				-0.7
1,235,038	-				-1.3
1,235,069	+				-0.7
1,235,092	-	ycgB	b1188	0.10	-1.0
1,235,092	-	ycgB	b1188	0.10	-1.1
1,235,136	-	ycgB	b1188	0.13	-1.8
1,235,251	+	ycgB	b1188	0.21	-1.2
1,235,263	+	ycgB	b1188	0.22	-0.9
1,235,263	+	ycgB	b1188	0.22	-2.1
1,235,362	-	ycgB	b1188	0.28	-0.7
1,235,483	-	ycgB	b1188	0.36	-1.4
1,235,815	-	ycgB	b1188	0.58	-1.3
1,235,815	-	ycgB	b1188	0.58	-1.1
1,236,122	+	ycgB	b1188	0.78	-1.0
1,236,187	-	ycgB	b1188	0.82	-0.8
1,236,339	-				-1.3
1,236,345	-				-2.2
1,236,374	+				-1.5
1,236,374	+				-0.4
1,236,414	-				-0.5
1,236,456	-				-0.6
1,236,788	-				+0.3
1,236,788	-				+0.4
1,236,803	+				-0.1
1,236,924	-	dadA	b1189	0.10	+0.4
1,237,037	+	dadA	b1189	0.19	+0.5
1,237,040	-	dadA	b1189	0.19	-0.3
1,237,146	+	dadA	b1189	0.27	+0.3
1,237,180	+	dadA	b1189	0.30	+0.5
1,237,213	+	dadA	b1189	0.32	+0.4
1,237,213	+	dadA	b1189	0.32	+1.1
1,237,218	+	dadA	b1189	0.33	+0.0