Strain Fitness in Escherichia coli BW25113 around b1058

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
1,117,570	-	yceI	b1056	0.77	+0.1
1,117,647	-				-0.5
1,117,681	-				-0.3
1,117,681	-				+0.1
1,117,815	-	yceJ	b1057	0.20	+0.1
1,117,815	-	yceJ	b1057	0.20	-0.4
1,117,815	-	yceJ	b1057	0.20	+0.3
1,117,815	-	yceJ	b1057	0.20	-0.5
1,117,978	-	yceJ	b1057	0.49	+0.6
1,118,027	+	yceJ	b1057	0.57	+0.1
1,118,027	+	yceJ	b1057	0.57	+0.8
1,118,058	-	yceJ	b1057	0.63	+0.5
1,118,086	-	yceJ	b1057	0.68	-0.4
1,118,117	-	yceJ	b1057	0.73	-0.6
1,118,130	+	yceJ	b1057	0.75	+2.4
1,118,130	+	yceJ	b1057	0.75	+0.0
1,118,138	-	yceJ	b1057	0.77	-0.4
1,118,138	-	yceJ	b1057	0.77	-0.2
1,118,138	-	yceJ	b1057	0.77	-0.8
1,118,138	-	yceJ	b1057	0.77	+0.8
1,118,146	+	yceJ	b1057	0.78	-1.7
1,118,146	+	yceJ	b1057	0.78	+0.2
1,118,160	-	yceJ	b1057	0.81	-1.7
1,118,165	+	yceJ	b1057	0.81	-0.2
1,118,165	+	yceJ	b1057	0.81	-0.1
1,118,166	+	yceJ	b1057	0.82	-0.4
1,118,168	+	yceJ	b1057	0.82	-0.2
1,118,171	-	yceJ	b1057	0.83	-0.3
1,118,171	-	yceJ	b1057	0.83	+0.3
1,118,173	-	yceJ	b1057	0.83	+0.2
1,118,194	+	yceJ	b1057	0.87	+0.5
1,118,195	+	yceJ	b1057	0.87	+1.5
1,118,219	+				-0.1
1,118,229	+				-0.5
1,118,230	+				+0.4
1,118,230	+				-0.2
1,118,230	+				-0.4
1,118,230	+				+0.6
1,118,238	-				-0.2
1,118,238	-				+0.2
1,118,248	-				+0.8
1,118,264	+				+0.2
1,118,266	+				+0.4
1,118,266	+				+0.7
1,118,430	+				+0.0
1,118,431	+				+2.4
1,118,431	+				+1.4
1,118,442	+				+2.4
1,118,443	+				+2.4
1,118,443	+				+1.0
1,118,484	+				+0.6
1,118,641	+	yceO	b1058	0.79	-0.8
1,118,641	+	yceO	b1058	0.79	+0.8
1,118,676	-				+2.4
1,118,689	-				-0.7
1,118,689	-				-0.4
1,118,815	-	solA	b1059	0.11	+0.5
1,118,815	-	solA	b1059	0.11	-0.0
1,118,817	-	solA	b1059	0.11	+0.4
1,118,820	-	solA	b1059	0.12	-0.3
1,118,820	-	solA	b1059	0.12	-0.2
1,118,820	-	solA	b1059	0.12	+1.2
1,118,830	-	solA	b1059	0.12	-0.3
1,118,830	-	solA	b1059	0.12	+0.3
1,118,830	-	solA	b1059	0.12	+0.0
1,118,830	-	solA	b1059	0.12	-1.5
1,118,830	-	solA	b1059	0.12	+0.1
1,118,830	-	solA	b1059	0.12	-0.1
1,118,830	-	solA	b1059	0.12	-0.0
1,118,830	-	solA	b1059	0.12	-0.5
1,118,832	-	solA	b1059	0.13	-1.0
1,118,832	-	solA	b1059	0.13	+0.5
1,118,843	-	solA	b1059	0.14	+0.3
1,118,843	-	solA	b1059	0.14	+0.8
1,118,851	-	solA	b1059	0.14	+0.4
1,118,891	-	solA	b1059	0.18	+1.4
1,118,891	-	solA	b1059	0.18	-0.2
1,118,891	-	solA	b1059	0.18	-0.0
1,118,891	-	solA	b1059	0.18	-0.1
1,118,892	-	solA	b1059	0.18	-0.0
1,118,893	-	solA	b1059	0.18	-0.4
1,118,893	-	solA	b1059	0.18	+0.5
1,118,901	-	solA	b1059	0.19	+0.2
1,118,901	-	solA	b1059	0.19	+0.1
1,118,904	-	solA	b1059	0.19	-0.3
1,118,911	-	solA	b1059	0.20	+1.0
1,118,911	-	solA	b1059	0.20	-0.1
1,118,911	-	solA	b1059	0.20	+0.4
1,118,911	-	solA	b1059	0.20	-0.2
1,118,948	+	solA	b1059	0.23	+2.4
1,118,956	-	solA	b1059	0.24	-0.1
1,118,956	-	solA	b1059	0.24	+0.0
1,118,956	-	solA	b1059	0.24	-0.1
1,118,967	-	solA	b1059	0.25	-0.7
1,119,006	-	solA	b1059	0.28	+0.6
1,119,008	-	solA	b1059	0.28	-0.0
1,119,008	-	solA	b1059	0.28	-0.2
1,119,084	-	solA	b1059	0.35	+0.3
1,119,084	-	solA	b1059	0.35	+0.1
1,119,136	+	solA	b1059	0.40	-1.2
1,119,165	+	solA	b1059	0.42	+1.4
1,119,165	+	solA	b1059	0.42	+0.6
1,119,179	-	solA	b1059	0.44	+0.1
1,119,179	-	solA	b1059	0.44	+0.4
1,119,244	+	solA	b1059	0.49	-0.2
1,119,552	+	solA	b1059	0.77	-0.2
1,119,579	+	solA	b1059	0.79	-0.2
1,119,584	-	solA	b1059	0.80	+0.6
1,119,612	+	solA	b1059	0.82	+0.2
1,119,618	+	solA	b1059	0.83	+0.0
1,119,623	-	solA	b1059	0.83	-0.9
1,119,634	-	solA	b1059	0.84	-1.0