Strain Fitness in Escherichia coli BW25113 around b0741

Experiment: Ying_OrganicAcid7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 1
777,299	-	tolB	b0740	0.26	-1.5
777,303	-	tolB	b0740	0.26	-0.9
777,393	-	tolB	b0740	0.33	-0.3
777,398	-	tolB	b0740	0.34	-0.8
777,444	-	tolB	b0740	0.37	-0.6
777,513	+	tolB	b0740	0.43	-1.3
777,522	-	tolB	b0740	0.43	-2.0
777,602	-	tolB	b0740	0.49	+0.1
777,602	-	tolB	b0740	0.49	-2.9
777,692	+	tolB	b0740	0.56	-0.4
777,700	-	tolB	b0740	0.57	-1.3
777,720	-	tolB	b0740	0.59	-0.3
777,770	-	tolB	b0740	0.62	-1.0
777,792	-	tolB	b0740	0.64	-1.5
777,839	-	tolB	b0740	0.68	-0.8
777,952	-	tolB	b0740	0.76	+0.2
777,954	-	tolB	b0740	0.77	-2.1
777,987	-	tolB	b0740	0.79	-1.1
778,009	-	tolB	b0740	0.81	-1.9
778,014	-	tolB	b0740	0.81	-2.9
778,020	-	tolB	b0740	0.82	-1.4
778,070	+	tolB	b0740	0.86	-0.9
778,127	-				-1.9
778,150	-				-1.5
778,150	-				-1.5
778,212	+				-1.9
778,212	+				-1.1
778,212	+				+1.1
778,220	-				-1.6
778,222	+				-1.6
778,316	+				-1.6
778,316	+				-0.7
778,382	+	pal	b0741	0.18	-1.3
778,420	-	pal	b0741	0.25	-1.5
778,422	-	pal	b0741	0.25	+0.8
778,455	+	pal	b0741	0.32	-1.5
778,455	+	pal	b0741	0.32	-3.0
778,560	+	pal	b0741	0.52	-0.8
778,568	-	pal	b0741	0.53	-2.3
778,596	-	pal	b0741	0.59	-1.2
778,600	+	pal	b0741	0.59	-0.7
778,604	-	pal	b0741	0.60	-2.3
778,656	-	pal	b0741	0.70	-2.2
778,656	-				-0.1
778,661	-	pal	b0741	0.71	-0.6
778,713	-	pal	b0741	0.81	-1.5
778,752	+	pal	b0741	0.89	-0.6
778,752	+	pal	b0741	0.89	-2.5
778,752	+	pal	b0741	0.89	-2.1
778,780	+				-0.4
778,780	+				-0.7
778,805	-				-1.4
778,851	+				-0.6
778,856	+				+0.1
778,864	-				+1.1
778,870	+				-0.3
778,932	+	ybgF	b0742	0.14	+0.1
778,940	-	ybgF	b0742	0.15	+0.2
778,940	-	ybgF	b0742	0.15	+0.2
778,940	-	ybgF	b0742	0.15	-0.3
778,940	-	ybgF	b0742	0.15	-0.6
779,036	+	ybgF	b0742	0.27	+0.1
779,145	+	ybgF	b0742	0.41	-0.3
779,145	+	ybgF	b0742	0.41	+0.5
779,158	-	ybgF	b0742	0.43	-0.7
779,196	+	ybgF	b0742	0.47	-0.0
779,201	+	ybgF	b0742	0.48	+1.4
779,201	+	ybgF	b0742	0.48	+0.7
779,204	-	ybgF	b0742	0.48	-0.6
779,263	-	ybgF	b0742	0.56	+0.7
779,263	-	ybgF	b0742	0.56	-0.6
779,269	+	ybgF	b0742	0.57	-0.9
779,342	+	ybgF	b0742	0.66	-0.1
779,342	+	ybgF	b0742	0.66	-0.2
779,392	-	ybgF	b0742	0.72	+0.4
779,428	-	ybgF	b0742	0.77	+0.0
779,510	+	ybgF	b0742	0.87	-0.2
779,544	-				+0.4
779,544	-				-0.0
779,565	+				+0.3
779,610	-				+0.9
779,619	+				+0.3