Strain Fitness in Escherichia coli BW25113 around b4172

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
4,397,420	+	miaA	b4171	0.15	+0.9
4,397,449	+	miaA	b4171	0.18	+0.6
4,397,449	+	miaA	b4171	0.18	+0.6
4,397,455	+	miaA	b4171	0.19	+0.2
4,397,458	-	miaA	b4171	0.19	-0.5
4,397,505	+	miaA	b4171	0.24	+1.0
4,397,549	-	miaA	b4171	0.29	-0.7
4,397,584	+	miaA	b4171	0.32	+1.0
4,397,589	-	miaA	b4171	0.33	-0.3
4,397,704	-	miaA	b4171	0.45	+1.9
4,397,763	-	miaA	b4171	0.51	+1.0
4,397,845	-	miaA	b4171	0.60	+0.6
4,397,853	+	miaA	b4171	0.61	+1.0
4,397,856	+	miaA	b4171	0.61	-0.7
4,397,866	+	miaA	b4171	0.62	+0.4
4,397,922	+	miaA	b4171	0.68	-0.4
4,397,935	+	miaA	b4171	0.69	+0.4
4,397,935	+	miaA	b4171	0.69	+0.1
4,398,137	+				+0.3
4,398,137	+				+0.1
4,398,156	+				-0.4
4,398,233	+				-0.1
4,398,233	+				-0.7
4,398,433	+	hfq	b4172	0.39	+2.6
4,398,562	+	hfq	b4172	0.81	+2.1
4,398,565	+	hfq	b4172	0.82	+1.4
4,398,593	+				+1.3
4,398,668	-				+0.2
4,398,675	-				+0.7
4,398,677	+				-0.2
4,398,677	+				-0.1
4,398,703	+				-0.1
4,398,714	+				+0.9
4,398,724	-				+0.3
4,398,728	+				+0.1
4,398,728	+				+0.4
4,398,793	+				+0.4
4,398,815	-				-0.9
4,398,815	-				+0.9
4,398,837	+	hflX	b4173	0.11	-0.6
4,398,926	-	hflX	b4173	0.18	-0.7
4,398,961	+	hflX	b4173	0.21	-0.5
4,398,961	+	hflX	b4173	0.21	-0.3
4,398,965	+	hflX	b4173	0.21	+0.2
4,398,965	+	hflX	b4173	0.21	-0.3
4,398,968	-	hflX	b4173	0.21	+0.6
4,398,983	-	hflX	b4173	0.22	+0.0
4,398,983	-	hflX	b4173	0.22	-0.0
4,398,992	-	hflX	b4173	0.23	-2.0
4,399,118	+	hflX	b4173	0.33	+0.3
4,399,140	+	hflX	b4173	0.35	-0.3
4,399,154	+	hflX	b4173	0.36	+0.5
4,399,217	-	hflX	b4173	0.41	-0.1
4,399,307	+	hflX	b4173	0.48	+0.3
4,399,307	+	hflX	b4173	0.48	-0.4
4,399,365	-	hflX	b4173	0.52	+0.1
4,399,365	-	hflX	b4173	0.52	+0.4
4,399,407	+	hflX	b4173	0.56	-0.3
4,399,407	+	hflX	b4173	0.56	-1.5
4,399,421	-	hflX	b4173	0.57	+0.6
4,399,449	-	hflX	b4173	0.59	+0.4
4,399,457	-	hflX	b4173	0.59	+0.7
4,399,457	-	hflX	b4173	0.59	+0.8
4,399,457	-	hflX	b4173	0.59	+0.3
4,399,500	-	hflX	b4173	0.63	-0.7
4,399,500	-	hflX	b4173	0.63	-0.2
4,399,542	+	hflX	b4173	0.66	-0.4