Strain Fitness in Escherichia coli BW25113 around b2017

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
2,086,500	+	yeeZ	b2016	0.21	+0.8
2,086,556	-	yeeZ	b2016	0.28	+0.4
2,086,579	+	yeeZ	b2016	0.30	-0.6
2,086,660	+	yeeZ	b2016	0.40	+0.3
2,086,660	+	yeeZ	b2016	0.40	-0.0
2,086,669	+	yeeZ	b2016	0.41	-2.2
2,086,672	-	yeeZ	b2016	0.42	+0.4
2,086,672	-	yeeZ	b2016	0.42	-0.3
2,086,871	-	yeeZ	b2016	0.66	-0.4
2,086,947	-	yeeZ	b2016	0.75	-0.4
2,087,058	+	yeeZ	b2016	0.88	-0.3
2,087,122	+				-0.2
2,087,178	-				+0.5
2,087,178	-				-0.1
2,087,187	-				+0.4
2,087,197	-				+0.2
2,087,364	-	yoeB	b4539	0.51	+0.4
2,087,506	-				+0.4
2,087,506	-				-0.1
2,087,544	+	yefM	b2017	0.23	+0.1
2,087,642	-	yefM	b2017	0.62	+0.8
2,087,867	+				-0.3
2,088,113	-				-0.3
2,088,203	-				+0.3
2,088,203	-				-0.3
2,088,316	+	hisG	b2019	0.11	-1.4
2,088,484	-	hisG	b2019	0.30	-2.9
2,088,602	+	hisG	b2019	0.43	-1.8
2,088,610	-	hisG	b2019	0.44	-2.6
2,088,610	-	hisG	b2019	0.44	-2.9
2,088,657	-	hisG	b2019	0.49	-3.4
2,088,681	-	hisG	b2019	0.52	-1.7