Strain Fitness in Escherichia coli BW25113 around b1955

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
2,022,610	+				+1.2
2,022,610	+				-0.4
2,022,627	-				+0.4
2,022,637	-				-0.3
2,022,650	-				+0.3
2,022,650	-				+0.6
2,022,674	-				-0.6
2,022,674	-				-0.9
2,022,694	+	dsrB	b1952	0.19	+1.1
2,022,694	+	dsrB	b1952	0.19	+0.7
2,022,720	-	dsrB	b1952	0.32	+0.4
2,022,770	+	dsrB	b1952	0.59	-0.2
2,022,770	+	dsrB	b1952	0.59	+0.5
2,022,787	-	dsrB	b1952	0.68	+0.1
2,022,787	-	dsrB	b1952	0.68	+0.2
2,022,790	+	dsrB	b1952	0.69	+0.4
2,022,792	-	dsrB	b1952	0.70	-0.1
2,022,874	+				-0.3
2,022,874	+				+0.1
2,022,874	+				-0.7
2,022,940	+				-0.2
2,022,942	+				+0.4
2,023,038	-	b1953	b1953	0.12	-0.2
2,023,107	+	b1953	b1953	0.43	+0.2
2,023,138	+	b1953	b1953	0.56	-0.2
2,023,138	+	b1953	b1953	0.56	-0.1
2,023,138	+	b1953	b1953	0.56	+0.4
2,023,267	-	dsrA	b1954	0.18	-0.5
2,023,298	+	dsrA	b1954	0.54	+0.6
2,023,343	-				-0.1
2,023,343	-				-0.1
2,023,439	-				+0.0
2,023,439	-				-0.8
2,023,517	+				+0.3
2,023,525	-				+1.0
2,023,525	-				-0.1
2,023,540	-				+0.0
2,023,540	-				-0.3
2,023,604	-				-0.8
2,023,631	-	yedP	b1955	0.12	+0.4
2,023,767	-	yedP	b1955	0.28	+1.2
2,024,110	+	yedP	b1955	0.70	-0.2
2,024,134	+	yedP	b1955	0.73	+0.5
2,024,165	+	yedP	b1955	0.77	+0.1
2,024,396	+				+0.3
2,024,459	+				+0.3
2,024,604	+	b1956	b1956	0.15	+0.3
2,024,869	+	b1956	b1956	0.31	-0.0
2,024,884	-	b1956	b1956	0.32	+0.1
2,024,884	-	b1956	b1956	0.32	+0.7
2,024,911	-	b1956	b1956	0.33	+0.3
2,025,014	+	b1956	b1956	0.39	-0.3
2,025,161	+	b1956	b1956	0.48	-0.2
2,025,161	+	b1956	b1956	0.48	-0.1
2,025,201	-	b1956	b1956	0.50	+1.0
2,025,201	-	b1956	b1956	0.50	-2.1