Strain Fitness in Escherichia coli BW25113 around b1914

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
1,991,798	-	uvrC	b1913	0.49	-0.3
1,991,798	-	uvrC	b1913	0.49	+0.7
1,991,857	+	uvrC	b1913	0.52	-1.0
1,991,922	+	uvrC	b1913	0.56	-0.3
1,991,948	-	uvrC	b1913	0.57	+0.1
1,992,150	+	uvrC	b1913	0.68	+0.1
1,992,202	+	uvrC	b1913	0.71	-0.3
1,992,227	-	uvrC	b1913	0.73	+0.1
1,992,461	-	uvrC	b1913	0.85	+0.2
1,992,461	-	uvrC	b1913	0.85	-0.1
1,992,523	-	uvrC	b1913	0.89	+1.4
1,992,523	-	uvrC	b1913	0.89	+0.1
1,992,721	+				-0.3
1,992,862	+	uvrY	b1914	0.21	+0.5
1,993,136	-	uvrY	b1914	0.62	+0.4
1,993,136	-	uvrY	b1914	0.62	+1.0
1,993,220	-	uvrY	b1914	0.75	+0.4
1,993,236	+	uvrY	b1914	0.77	+0.7
1,993,236	+	uvrY	b1914	0.77	+0.4
1,993,244	-	uvrY	b1914	0.79	+0.5
1,993,244	-	uvrY	b1914	0.79	+0.5
1,993,268	-	uvrY	b1914	0.82	+0.2
1,993,309	+	uvrY	b1914	0.89	+0.4
1,993,317	+	uvrY	b1914	0.90	+0.3
1,993,328	+				-0.0
1,993,345	+				-0.2
1,993,350	+				+0.6
1,993,350	+				+0.2
1,993,358	-				+1.2
1,993,415	-				-0.3
1,993,419	+				+0.4
1,993,419	-				+0.7
1,993,522	+				-0.0
1,993,522	+				+0.4
1,993,522	+				+0.8
1,993,522	+				+0.1
1,993,534	+				-1.4
1,993,537	+				+0.4
1,993,540	-				+1.6
1,993,542	-				+0.6
1,993,548	-				+2.1
1,993,548	-				+2.1
1,993,549	+				+0.5
1,993,559	+				+0.2
1,993,559	+				+0.1
1,993,559	+				+0.5
1,993,559	+				+0.1
1,993,559	+				+0.2
1,993,559	+				+0.1
1,993,560	+				-0.4
1,993,560	+				-0.2
1,993,565	+				-0.0
1,993,571	+				+0.1
1,993,571	+				-1.1
1,993,571	+				+0.0
1,993,717	+				-0.3
1,993,717	+				-0.2
1,993,771	+				+0.1
1,993,771	+				+0.2
1,993,771	+				-0.3
1,993,772	+				+0.2
1,993,775	+				-0.6
1,993,775	+				+1.8
1,993,775	+				-0.9
1,993,777	+				-0.0
1,993,777	+				-0.3
1,993,777	+				+0.1
1,993,777	+				-0.2
1,993,786	-				+2.1
1,993,864	-				-0.0
1,993,864	-				+0.8
1,993,894	-	yecF	b1915	0.23	+0.1
1,993,903	+	yecF	b1915	0.27	-0.2
1,993,921	+	yecF	b1915	0.35	+0.4
1,993,921	+	yecF	b1915	0.35	-0.0
1,993,921	+	yecF	b1915	0.35	-0.6
1,993,921	+	yecF	b1915	0.35	+0.7
1,993,922	-	yecF	b1915	0.36	-0.3
1,993,922	-	yecF	b1915	0.36	+0.5
1,993,928	+	yecF	b1915	0.38	+0.1
1,993,929	-	yecF	b1915	0.39	+0.9
1,993,934	+	yecF	b1915	0.41	-0.2
1,993,934	+	yecF	b1915	0.41	+0.2
1,993,937	+	yecF	b1915	0.42	-0.2
1,993,961	+	yecF	b1915	0.53	+0.1
1,993,961	+	yecF	b1915	0.53	+0.4
1,994,001	+	yecF	b1915	0.71	+0.9
1,994,015	-	yecF	b1915	0.77	+0.6
1,994,100	+				+1.1
1,994,110	-				-0.3
1,994,110	-				-0.9
1,994,120	-				-0.8
1,994,154	-				+0.9
1,994,154	-				+0.2
1,994,155	-				+0.3
1,994,249	+	sdiA	b1916	0.16	+1.5
1,994,262	+	sdiA	b1916	0.18	-0.1
1,994,268	-	sdiA	b1916	0.19	+0.4
1,994,283	-	sdiA	b1916	0.21	+0.5
1,994,332	+	sdiA	b1916	0.27	+0.1
1,994,344	-	sdiA	b1916	0.29	+0.9
1,994,344	-	sdiA	b1916	0.29	+0.7
1,994,345	-	sdiA	b1916	0.29	+1.0
1,994,357	-	sdiA	b1916	0.31	+0.5
1,994,357	-	sdiA	b1916	0.31	+0.7
1,994,364	+	sdiA	b1916	0.32	+0.6
1,994,367	-	sdiA	b1916	0.32	+1.9
1,994,367	-	sdiA	b1916	0.32	+0.4
1,994,367	-	sdiA	b1916	0.32	+0.3
1,994,378	-	sdiA	b1916	0.34	+0.0
1,994,378	-	sdiA	b1916	0.34	+0.7
1,994,381	-	sdiA	b1916	0.34	+0.1