Strain Fitness in Escherichia coli BW25113 around b1822

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
1,903,496	-				-0.4
1,903,498	-				+0.2
1,903,529	+				-0.2
1,903,537	-				-0.0
1,903,548	+				-0.1
1,903,553	+				-0.3
1,903,558	+				+0.4
1,903,558	+				+0.1
1,903,583	+				+0.1
1,903,602	-				-0.8
1,903,602	-				-0.2
1,903,639	-				-0.5
1,903,654	-				+0.2
1,903,702	+				+0.3
1,903,777	-	b1821	b1821	0.11	+0.0
1,903,777	-	b1821	b1821	0.11	+0.1
1,904,065	-	b1821	b1821	0.62	+0.7
1,904,087	-	b1821	b1821	0.66	+1.0
1,904,603	+	rrmA	b1822	0.40	+0.3
1,904,603	+	rrmA	b1822	0.40	+0.6
1,904,691	+	rrmA	b1822	0.51	+0.7
1,904,897	-	rrmA	b1822	0.77	+1.4
1,904,988	-	rrmA	b1822	0.88	-0.2
1,905,238	-				-0.3
1,905,238	-				+0.6
1,905,348	+	cspC	b1823	0.47	-1.2
1,905,364	-	cspC	b1823	0.54	+0.9
1,905,432	+	cspC	b1823	0.87	+0.2
1,905,432	+	cspC	b1823	0.87	+0.3
1,905,534	-	yobF	b1824	0.43	+0.9
1,905,534	-	yobF	b1824	0.43	+1.0
1,905,536	+	yobF	b1824	0.44	+0.9
1,905,562	+	yobF	b1824	0.62	+0.4
1,905,562	+	yobF	b1824	0.62	+0.4
1,905,613	+				+1.2
1,905,619	-				+0.6
1,905,629	-				+0.5
1,905,647	+				+1.2
1,905,751	-				-1.0
1,905,751	-				+0.0
1,905,771	+				-2.4
1,905,782	+				-0.4
1,905,879	-				-0.8
1,905,881	-				+2.1