Strain Fitness in Escherichia coli BW25113 around b1350

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
1,411,844	-	lar	b1348	0.45	+1.2
1,411,855	-	lar	b1348	0.50	+0.8
1,411,865	-	lar	b1348	0.55	-0.8
1,411,865	-	lar	b1348	0.55	+0.1
1,411,867	-	lar	b1348	0.56	-0.6
1,411,880	-	lar	b1348	0.63	-0.4
1,411,880	-	lar	b1348	0.63	-0.3
1,412,066	-				-0.2
1,412,069	-				-0.4
1,412,069	-				+0.3
1,412,080	-				+0.4
1,412,090	-	recT	b1349	0.10	-0.2
1,412,103	-	recT	b1349	0.12	-0.7
1,412,103	-	recT	b1349	0.12	+0.1
1,412,113	-	recT	b1349	0.13	-0.2
1,412,192	-	recT	b1349	0.23	-0.2
1,412,213	-	recT	b1349	0.25	-0.2
1,412,213	-	recT	b1349	0.25	+0.5
1,412,235	-	recT	b1349	0.28	-0.1
1,412,302	-	recT	b1349	0.36	-0.5
1,412,302	-	recT	b1349	0.36	-0.1
1,412,538	-	recT	b1349	0.65	-0.1
1,412,896	+				-0.9
1,412,896	+				-0.6
1,412,896	-				-0.2
1,412,896	-				-0.4
1,413,042	+				-0.1
1,413,054	+				+0.6
1,413,054	+				-0.4
1,413,135	+	recE	b1350	0.12	+0.4
1,413,341	+	recE	b1350	0.20	-1.0
1,413,411	+	recE	b1350	0.23	+0.7
1,413,411	+	recE	b1350	0.23	-0.2
1,413,755	-	recE	b1350	0.36	+0.5
1,413,755	-	recE	b1350	0.36	+0.3
1,413,958	-	recE	b1350	0.44	+0.2
1,413,977	-	recE	b1350	0.45	+0.6
1,414,203	+	recE	b1350	0.54	+0.3
1,414,203	+	recE	b1350	0.54	-0.2
1,414,291	-	recE	b1350	0.57	+1.4
1,414,310	-	recE	b1350	0.58	+1.7
1,414,602	-	recE	b1350	0.69	+0.6
1,414,633	-	recE	b1350	0.70	+1.5
1,414,633	-	recE	b1350	0.70	+1.0
1,414,719	-	recE	b1350	0.73	+1.0
1,414,747	+	recE	b1350	0.74	+0.1
1,414,758	+	recE	b1350	0.75	+0.4
1,414,758	+	recE	b1350	0.75	+0.7
1,415,046	+	recE	b1350	0.86	+0.1
1,415,106	+	recE	b1350	0.88	+0.7
1,415,187	+				-0.1
1,415,187	+				-0.2
1,415,195	-				-0.0
1,415,195	-				+0.1
1,415,195	-				+0.8
1,415,300	+				+0.3
1,415,416	-				-0.5
1,415,468	+				+0.1
1,415,468	+				+2.7
1,415,468	+				+0.3
1,415,468	+				+0.5
1,415,468	+				+0.3
1,415,468	+				-0.4
1,415,484	+				-0.5
1,415,538	+				-0.2
1,415,620	+	racC	b1351	0.39	+1.5
1,415,625	-	racC	b1351	0.41	+0.5
1,415,649	-	racC	b1351	0.50	-0.2