Strain Fitness in Escherichia coli BW25113 around b1253

Experiment: Ying_OrganicAcid7 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 1
1,309,193	+	tonB	b1252	0.11	-0.1
1,309,201	-	tonB	b1252	0.12	+1.3
1,309,201	-	tonB	b1252	0.12	-2.3
1,309,201	-	tonB	b1252	0.12	-0.4
1,309,474	+	tonB	b1252	0.50	-2.3
1,309,533	-	tonB	b1252	0.58	-0.6
1,309,533	-	tonB	b1252	0.58	-0.8
1,309,610	+	tonB	b1252	0.69	-1.6
1,309,705	-	tonB	b1252	0.82	-0.1
1,309,705	-	tonB	b1252	0.82	-1.1
1,310,036	+	yciA	b1253	0.41	+0.1
1,310,036	+	yciA	b1253	0.41	+1.4
1,310,046	+	yciA	b1253	0.44	+0.1
1,310,061	+	yciA	b1253	0.47	+1.3
1,310,141	-	yciA	b1253	0.67	-0.1
1,310,410	+				-0.9
1,310,416	-				-0.2
1,310,650	-	yciB	b1254	0.51	-1.1
1,310,809	-	yciB	b1254	0.80	-0.2
1,311,105	+	yciC	b1255	0.22	+1.3
1,311,105	+	yciC	b1255	0.22	-1.6
1,311,187	-	yciC	b1255	0.33	+0.1
1,311,189	+	yciC	b1255	0.33	-0.3
1,311,212	-	yciC	b1255	0.36	-0.3
1,311,212	-	yciC	b1255	0.36	-0.6