Strain Fitness in Escherichia coli BW25113 around b4492

Experiment: Ying_AminoAcid20 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 1
1,462,521	+				+0.5
1,462,521	+				+1.2
1,462,975	+	paaY	b1400	0.81	-0.6
1,462,975	+	paaY	b1400	0.81	+0.6
1,462,988	+	paaY	b1400	0.83	-0.4
1,463,000	+	paaY	b1400	0.85	-0.6
1,463,053	+				-0.3
1,463,053	+				+0.3
1,463,080	+				-1.1
1,463,082	+				+0.2
1,463,499	-				+1.2
1,463,499	-				+1.2
1,463,754	-	ydbA	b4492	0.13	+0.2
1,463,761	-	ydbA	b4492	0.14	-2.0
1,463,762	-	ydbA	b4492	0.14	+0.1
1,463,764	-	ydbA	b4492	0.14	+1.2
1,463,764	-	ydbA	b4492	0.14	+2.2
1,463,791	+	ydbA	b4492	0.15	-0.4
1,463,801	+	ydbA	b4492	0.15	-1.0
1,463,809	-	ydbA	b4492	0.16	+1.8
1,463,813	+	ydbA	b4492	0.16	-1.0
1,463,813	+	ydbA	b4492	0.16	+0.8
1,463,813	+	ydbA	b4492	0.16	+0.2
1,463,813	+	ydbA	b4492	0.16	-0.8
1,463,821	-	ydbA	b4492	0.16	+1.8
1,463,822	-	ydbA	b4492	0.16	-0.8
1,463,874	+	ydbA	b4492	0.18	+0.3
1,463,874	+	ydbA	b4492	0.18	-0.0
1,463,924	-	ydbA	b4492	0.20	+0.2
1,463,928	-	ydbA	b4492	0.20	-0.4
1,463,932	-	ydbA	b4492	0.21	-0.8
1,463,933	-	ydbA	b4492	0.21	-2.2
1,463,971	-	ydbA	b4492	0.22	+1.0
1,463,971	-	ydbA	b4492	0.22	-0.7
1,463,989	-	ydbA	b4492	0.23	+0.6
1,464,012	-	ydbA	b4492	0.24	-0.6
1,464,023	-	ydbA	b4492	0.24	+0.3
1,464,023	-	ydbA	b4492	0.24	-0.2
1,464,026	-	ydbA	b4492	0.24	-2.9
1,464,026	-	ydbA	b4492	0.24	-0.8
1,464,091	+	ydbA	b4492	0.27	-0.2
1,464,194	-	ydbA	b4492	0.31	-1.3
1,464,194	-	ydbA	b4492	0.31	-0.8
1,464,246	+				-0.1
1,464,254	+	ydbA	b4492	0.33	+0.0
1,464,254	+	ydbA	b4492	0.33	+2.0
1,464,283	+	ydbA	b4492	0.35	+0.1
1,464,371	-	ydbA	b4492	0.38	-0.0
1,464,385	+	ydbA	b4492	0.39	-0.2
1,464,612	-	ydbA	b4492	0.48	+0.2
1,465,027	+	ydbA	b4492	0.64	+0.4
1,465,080	-	ydbA	b4492	0.66	+0.2
1,465,080	-	ydbA	b4492	0.66	-0.8
1,465,164	-	ydbA	b4492	0.70	-0.6
1,465,179	-	ydbA	b4492	0.70	+0.2
1,465,179	-	ydbA	b4492	0.70	+0.4
1,465,239	+	ydbA	b4492	0.73	+0.8
1,465,246	+	ydbA	b4492	0.73	-0.0
1,465,307	+	ydbA	b4492	0.75	+0.6
1,465,307	+	ydbA	b4492	0.75	-0.2
1,465,318	-	ydbA	b4492	0.76	+1.0
1,465,318	-	ydbA	b4492	0.76	-2.4
1,465,415	-	ydbA	b4492	0.80	-1.1
1,465,563	+	ydbA	b4492	0.85	-0.2
1,465,638	-	ydbA	b4492	0.88	+2.2
1,465,641	+	ydbA	b4492	0.89	+0.2
1,465,669	-	ydbA	b4492	0.90	+1.2
1,465,732	+				-1.2
1,465,732	+				+0.4
1,465,732	+				+0.5
1,465,925	-				+1.9
1,465,939	-				+2.9
1,465,939	-				-0.6