Strain Fitness in Escherichia coli BW25113 around b1931

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
2,006,951	-	yedE	b1929	0.54	-0.5
2,006,989	+	yedE	b1929	0.57	+0.2
2,007,062	+	yedE	b1929	0.63	-0.2
2,007,062	+	yedE	b1929	0.63	-0.6
2,007,131	+	yedE	b1929	0.69	+0.2
2,007,131	+	yedE	b1929	0.69	+0.1
2,007,244	-	yedE	b1929	0.78	-1.6
2,007,257	-	yedE	b1929	0.79	+0.0
2,007,261	+	yedE	b1929	0.80	-0.2
2,007,263	-	yedE	b1929	0.80	+0.1
2,007,314	+	yedE	b1929	0.84	+0.1
2,007,541	+	yedF	b1930	0.16	+0.2
2,007,542	+	yedF	b1930	0.17	+0.1
2,007,627	+	yedF	b1930	0.53	+0.2
2,007,628	-	yedF	b1930	0.53	+0.7
2,007,630	+	yedF	b1930	0.54	-0.5
2,007,656	-	yedF	b1930	0.65	+0.2
2,007,710	+	yedF	b1930	0.88	-0.6
2,007,744	+				+0.5
2,007,763	-				+0.5
2,007,767	-				+0.2
2,007,775	-				+0.5
2,007,931	+	yedK	b1931	0.13	+0.4
2,008,001	-	yedK	b1931	0.23	+0.6
2,008,003	+	yedK	b1931	0.24	+0.7
2,008,003	+	yedK	b1931	0.24	-1.9
2,008,095	+	yedK	b1931	0.37	-0.1
2,008,119	-	yedK	b1931	0.41	+0.2
2,008,295	-	yedK	b1931	0.67	+0.7
2,008,389	+	yedK	b1931	0.81	-0.1
2,008,506	+				+0.1
2,008,506	+				+0.2
2,008,534	+				-1.5
2,008,661	-				-0.3
2,008,671	-				-0.9
2,008,696	-	yedL	b1932	0.15	-0.3
2,008,707	-	yedL	b1932	0.17	+1.7
2,008,707	-	yedL	b1932	0.17	+0.7
2,008,728	+	yedL	b1932	0.22	-0.2
2,008,729	+	yedL	b1932	0.22	+1.0
2,008,767	+	yedL	b1932	0.30	-0.1
2,008,767	+	yedL	b1932	0.30	-1.8
2,008,777	+	yedL	b1932	0.32	-0.5
2,008,777	+	yedL	b1932	0.32	+0.3
2,008,785	-	yedL	b1932	0.34	-1.1
2,008,785	-	yedL	b1932	0.34	-0.4
2,008,785	-	yedL	b1932	0.34	-0.5
2,008,785	-	yedL	b1932	0.34	-1.6
2,008,785	-	yedL	b1932	0.34	+0.7
2,008,785	-	yedL	b1932	0.34	+0.4
2,008,899	-	yedL	b1932	0.57	-0.4
2,008,899	-	yedL	b1932	0.57	+0.2
2,008,921	+	yedL	b1932	0.62	+0.4
2,008,921	+	yedL	b1932	0.62	-0.3
2,008,921	+	yedL	b1932	0.62	+0.4
2,008,926	+	yedL	b1932	0.63	-0.1
2,008,926	+	yedL	b1932	0.63	-0.0
2,008,929	-	yedL	b1932	0.64	-0.6
2,008,929	-	yedL	b1932	0.64	+1.2
2,008,950	-	yedL	b1932	0.68	+0.8
2,008,950	-	yedL	b1932	0.68	+0.8
2,008,958	+	yedL	b1932	0.70	-0.0
2,008,981	-	yedL	b1932	0.74	+0.4
2,009,019	-	yedL	b1932	0.82	+2.4
2,009,102	+				-0.1
2,009,171	+				+2.4
2,009,179	-				+2.4
2,009,184	-				+1.4
2,009,189	+				+2.4